EY729045

Overview
NameEY729045
Unique NameEY729045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB9 (Putative agmatine deiminase OS=Shewanella baltica (strain OS195) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB8 (Putative agmatine deiminase OS=Shewanella baltica (strain OS185) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDEADPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB5 (Putative agmatine deiminase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEB2 (Putative agmatine deiminase OS=Shewanella baltica (strain OS223) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y+R  AA DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDETDPQYSRSKAAFDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHESR (Putative agmatine deiminase OS=Shewanella sp. (strain MR-7) GN=aguA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.520e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVVLHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_ERWCT (Putative agmatine deiminase OS=Erwinia carotovora subsp. atroseptica GN=aguA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.291e-22
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGH+DN CC+VRPGEV L WTDD  DP YAR  AA +VL ++ DAQGR   + K+P PGPL+AT
Sbjct:  213 YNDETDGHIDNMCCFVRPGEVALHWTDDENDPQYARSVAAYEVLSAARDAQGRELKIWKLPAPGPLHAT 281          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEON (Putative agmatine deiminase OS=Shewanella oneidensis GN=aguA PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.251e-21
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA++VLQ++ DAQGR   +H +P PGPLY +
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDESDPQYPRSKAALEVLQNTVDAQGRKLKIHLLPQPGPLYCS 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHESW (Putative agmatine deiminase OS=Shewanella sp. (strain W3-18-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.862e-20
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN  C+ RPGEV+L WTDD  DP Y R  AA++VLQ++ DA+GR   +H +P PGPLY +
Sbjct:  215 YMDETDGHIDNMSCFARPGEVILHWTDDETDPQYPRSKAALEVLQNTVDAKGRKLKIHLLPQPGPLYCS 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEPC (Putative agmatine deiminase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=aguA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.862e-20
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN  C+ RPGEV+L WTDD  DP Y R  AA++VLQ++ DA+GR   +H +P PGPLY +
Sbjct:  215 YMDETDGHIDNMSCFARPGEVILHWTDDETDPQYPRSKAALEVLQNTVDAKGRKLKIHLLPQPGPLYCS 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PHOPR (Putative agmatine deiminase OS=Photobacterium profundum GN=aguA PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = -2
Query:   25 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLY 225
            +NDET+GHVDN    VRPGE+ L W DD  DP Y     AMDVL + TDA+GR   +HK+P+PGPLY
Sbjct:  209 YNDETNGHVDNLIHVVRPGEIALTWCDDETDPQYLISRKAMDVLLTETDAKGRQIKIHKLPMPGPLY 275          
The following BLAST results are available for this feature:
BLAST of EY729045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AGUA_SHEB91.929e-2262.32Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_SHEB81.929e-2262.32Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_SHEB51.929e-2262.32Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_SHEB21.929e-2262.32Putative agmatine deiminase OS=Shewanella baltica ... [more]
AGUA_SHESR2.520e-2262.32Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_ERWCT3.291e-2263.77Putative agmatine deiminase OS=Erwinia carotovora ... [more]
AGUA_SHEON1.251e-2159.42Putative agmatine deiminase OS=Shewanella oneidens... [more]
AGUA_SHESW6.862e-2056.52Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHEPC6.862e-2056.52Putative agmatine deiminase OS=Shewanella putrefac... [more]
AGUA_PHOPR2.883e-1858.21Putative agmatine deiminase OS=Photobacterium prof... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729045 ID=EY729045; Name=EY729045; organism=Citrus sinensis; type=EST; length=226bp
CCGGCGCATTCTTCCTCNGGTTGCGTACAGCGGCCCCGGGATCGGCATTT
TATGCACTGTGAACGAGCGGCCCTGAGCGTCAGTGCTGCTTTGCAGTACG
TCCATGGCGGCATGGCAGCGTGCGTAGTTTGGGTCTTGCGGGTCGTCGGT
CCACGCCAGCAACACTTCGCCCGGGCGCACGTAGCAGCAGAAGTTATCCA
CATGCCCGTCGGTTTCGTCATTGAAC
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