EY729045

Overview
NameEY729045
Unique NameEY729045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SELRU (Putative agmatine deiminase OS=Selenomonas ruminantium GN=aguA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.918e-18
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = -2
Query:   37 NDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 222
            NDET+ HVDN   +VRPGEVLLAWTDD  DP Y    A ++VL+S+TDA+GR F +HK+PIP
Sbjct:  214 NDETNEHVDNVFAFVRPGEVLLAWTDDKDDPQYELSQADLEVLESATDARGRKFVIHKLPIP 275          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_VIBPA (Putative agmatine deiminase OS=Vibrio parahaemolyticus GN=aguA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = -2
Query:   25 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLY 225
            FNDETDGHVDN    + PG+V+L+WTDDP DP YA    A  VL+S  DA+GR   + ++P+PGPL+
Sbjct:  207 FNDETDGHVDNLMHVIAPGKVVLSWTDDPSDPQYALSRQAEQVLKSQHDAKGREIEIVRLPLPGPLH 273          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_ARATH (Agmatine deiminase OS=Arabidopsis thaliana GN=AIH PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = -2
Query:   19 NDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 222
            +++T+GH+DN CC+ RPG VLL+WTDD  DP Y R   A+ VL +S DA+GR   V K+ IP PLY T
Sbjct:  218 DEDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMT 285          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_STRPI (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=aguA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:   37 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 225
            + DET+ HVDN   +V P EV+LAWTDD  DP YA   A +++L+  TDA+G  FT+HK+PIP
Sbjct:  206 YQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQETDAKGCHFTIHKLPIP 268          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_STRR6 (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=aguA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:   37 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 225
            + DET+ HVDN   +V P EV+LAWTDD  DP YA   A +++L+  TDA+G  FT+HK+PIP
Sbjct:  206 YQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQETDAKGCHFTIHKLPIP 268          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_STRPS (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain CGSP14) GN=aguA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:   37 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 225
            + DET+ HVDN   +V P EV+LAWTDD  DP YA   A +++L+  TDA+G  FT+HK+PIP
Sbjct:  206 YQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQETDAKGCHFTIHKLPIP 268          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_STRPJ (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:   37 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 225
            + DET+ HVDN   +V P EV+LAWTDD  DP YA   A +++L+  TDA+G  FT+HK+PIP
Sbjct:  206 YQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQETDAKGCHFTIHKLPIP 268          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_STRP2 (Putative agmatine deiminase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=aguA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = -2
Query:   37 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIP 225
            + DET+ HVDN   +V P EV+LAWTDD  DP YA   A +++L+  TDA+G  FT+HK+PIP
Sbjct:  206 YQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQETDAKGCHFTIHKLPIP 268          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_MYCMS (Putative agmatine deiminase OS=Mycoplasma mycoides subsp. mycoides SC GN=aguA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDET+GHVDN    V PG V+L WTDD  DP Y R   A D+L ++ DA+GR   V K+  PGPL+ T
Sbjct:  209 YNDETNGHVDNLLNVVSPGHVVLTWTDDTTDPQYERSKLAYDILTNTLDAKGRKIKVTKLHQPGPLFIT 277          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_MYCCT (Putative agmatine deiminase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=aguA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDET+GHVDN    V PG V+L WTDD  DP Y R   A D+L ++ DA+GR   V K+  PGPL+ T
Sbjct:  209 YNDETNGHVDNLLHVVSPGHVVLTWTDDTTDPQYERSKLAYDILTNTLDAKGRKIKVTKLHQPGPLFIT 277          
The following BLAST results are available for this feature:
BLAST of EY729045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AGUA_SELRU4.918e-1862.90Putative agmatine deiminase OS=Selenomonas ruminan... [more]
AGUA_VIBPA4.163e-1755.22Putative agmatine deiminase OS=Vibrio parahaemolyt... [more]
AGUA_ARATH9.274e-1754.41Agmatine deiminase OS=Arabidopsis thaliana GN=AIH ... [more]
AGUA_STRPI2.983e-1553.97Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRR63.897e-1553.97Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRPS3.897e-1553.97Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRPJ3.897e-1553.97Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRP23.897e-1553.97Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_MYCMS5.089e-1552.17Putative agmatine deiminase OS=Mycoplasma mycoides... [more]
AGUA_MYCCT5.089e-1552.17Putative agmatine deiminase OS=Mycoplasma capricol... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729045 ID=EY729045; Name=EY729045; organism=Citrus sinensis; type=EST; length=226bp
CCGGCGCATTCTTCCTCNGGTTGCGTACAGCGGCCCCGGGATCGGCATTT
TATGCACTGTGAACGAGCGGCCCTGAGCGTCAGTGCTGCTTTGCAGTACG
TCCATGGCGGCATGGCAGCGTGCGTAGTTTGGGTCTTGCGGGTCGTCGGT
CCACGCCAGCAACACTTCGCCCGGGCGCACGTAGCAGCAGAAGTTATCCA
CATGCCCGTCGGTTTCGTCATTGAAC
back to top