EY729037

Overview
NameEY729037
Unique NameEY729037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.149e-27
Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 1
Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            + I  +  R+DL+E E  A +  ++N EA  A +  FLV L  KGET  E+   AR M   AT+VE   G  VD  GTGGD + + NIST ++++ AA G +VAK             DVLEA GV +DL PE V RC+++  +GF+ + K+H AM
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDEVTAAARVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGFLFAPKHHGAM 160          

HSP 2 Score: 28.8758 bits (63), Expect = 2.149e-27
Identity = 16/51 (31.37%), Postives = 25/51 (49.02%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA  P  V+G      +  +A  L R G +   +     GL+E
Sbjct:  177 NVLGPLTNPAGAPNQVLGVFSNRWLEPLARVLGRLGSRHVMVVHAEDGLDE 227          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.798e-27
Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query:  211 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D   +GF+ +  YH AM
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAM 159          

HSP 2 Score: 29.6462 bits (65), Expect = 2.798e-27
Identity = 18/51 (35.29%), Postives = 25/51 (49.02%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGP+ NPA V   V+G     L+   A  L   G +   +   G GL+E
Sbjct:  176 NILGPLTNPAFVKGQVMGVYDRKLLEPAAKTLLNLGCERAMVVHGGDGLDE 226          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.798e-27
Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query:  211 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D   +GF+ +  YH AM
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAM 159          

HSP 2 Score: 29.6462 bits (65), Expect = 2.798e-27
Identity = 18/51 (35.29%), Postives = 25/51 (49.02%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGP+ NPA V   V+G     L+   A  L   G +   +   G GL+E
Sbjct:  176 NILGPLTNPAFVKGQVMGVYDRKLLEPAAKTLLNLGCERAMVVHGGDGLDE 226          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.798e-27
Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EA +GFM +  +HPAM
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAM 160          

HSP 2 Score: 30.8018 bits (68), Expect = 2.798e-27
Identity = 17/51 (33.33%), Postives = 28/51 (54.90%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   +VG      +L +A  L+  G +  W+ + G G +E
Sbjct:  177 NLLGPLSNPAGVVRQMVGVFLPEWILPVAETLKALGTEHAWV-VHGDGYDE 226          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.798e-27
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ EA IGFM +  +HPAM
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFMFAPAHHPAM 160          

HSP 2 Score: 30.8018 bits (68), Expect = 2.798e-27
Identity = 17/51 (33.33%), Postives = 25/51 (49.02%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   +VG      V  +A  L+  G    W+     GL+E
Sbjct:  177 NLLGPLSNPAGVKRQMVGVFSRQWVEPLAQVLKNLGSGAAWVVHGSDGLDE 227          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.640e-27
Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D   IGFM +  +H AM
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAM 161          

HSP 2 Score: 33.113 bits (74), Expect = 3.640e-27
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   VVG   + L   +A  L+R G K   +     GL+E
Sbjct:  178 NMLGPLTNPAGVKHQVVGVFAQTLCRPLAEVLQRLGSKHVLVVHSKDGLDE 228          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.640e-27
Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   A +++    A+DIVGTGGD A T NIST A+++ AACG  VAK             DVL ALGV +D D   V R + E  IGFM + ++H AM
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAEVGIGFMFAQRHHSAM 167          

HSP 2 Score: 34.2686 bits (77), Expect = 3.640e-27
Identity = 17/51 (33.33%), Postives = 27/51 (52.94%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA   F ++G   +  V  +A  L R G +  W+     GL+E
Sbjct:  184 NLLGPLANPAGARFELMGVFAQEWVEPLAEVLGRLGAERAWVVHGSDGLDE 234          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.640e-27
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM    T+V    +AVD+VGTGGD + +VN+ST A+I+ AACG  VAK             DVL ALGV + LDP    RC+DEA + F+ +  +HPAM
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGNRAATSRSGAADVLAALGVRLGLDPAAQARCLDEAGLCFLFAQAHHPAM 160          

HSP 2 Score: 28.4906 bits (62), Expect = 3.640e-27
Identity = 15/51 (29.41%), Postives = 23/51 (45.10%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V + + G     L   +   L   G +  W      GL+E
Sbjct:  177 NLLGPLSNPAGVGYQLFGVAQAALAEPLTRVLAELGSRRVWTVHGSDGLDE 227          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.640e-27
Identity = 62/131 (47.33%), Postives = 77/131 (58.78%), Query Frame = 1
Query:  292 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E    + +A +  LR K ET GEI   A+ M + + KV  + D    VDIVGTGGDGANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ +  IGFM +  +HPAM
Sbjct:   34 ELSPVMTAAIVTGLRVKKETIGEITAAAQVMRELSRKV-AVADTTHLVDIVGTGGDGANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAM 163          

HSP 2 Score: 35.039 bits (79), Expect = 3.640e-27
Identity = 20/46 (43.48%), Postives = 27/46 (58.70%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKG 859
            +ILGP+ NPA  P  ++G  H +LV     AL+R G  EH L + G
Sbjct:  180 NILGPLTNPAGAPNILMGVFHPDLVGIQVRALQRLG-AEHALVVYG 224          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.640e-27
Identity = 63/130 (48.46%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  292 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + +  IGFM +  +HPAM
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRCHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAM 163          

HSP 2 Score: 35.4242 bits (80), Expect = 3.640e-27
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGP+ NPAC P  ++G  H +LV   A  L+  G +   +     G++E
Sbjct:  180 NILGPLTNPACSPNILMGVFHPDLVGIQARVLQELGAERALVVWGRDGMDE 230          
The following BLAST results are available for this feature:
BLAST of EY729037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_THISH2.149e-2741.67Anthranilate phosphoribosyltransferase OS=Thioalka... [more]
TRPD_CLOK52.798e-2740.13Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK12.798e-2740.13Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_RHILO2.798e-2742.36Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_BRASO2.798e-2743.75Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_PSEPU3.640e-2741.45Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_RHORT3.640e-2743.06Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_METRJ3.640e-2745.83Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_ACIAC3.640e-2747.33Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_XANCB3.640e-2748.46Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-G05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729037 ID=EY729037; Name=EY729037; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGA
AGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGAT
GGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGC
TTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCAT
GTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGAC
CCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCANGAATTGGTTTCATGAT
GTCGACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAA
AGCTCAAAGTAAAACTGTATTCATATATTGGGTCCTATGTTGAATCCTGC
ATGTGTGCCATTCGCTGTGGTTGGTGGTTTACATGAAAACTTGGTACTCC
AAATGGCCCATGCCCTGCGACGATTTGGCCTGAAAGAGCATTGGTTGTTC
CTCAAAGGGTTTGGATTAAATGAGTCCCCTGGG
back to top