EY729037 | Citrus Genome Database

Overview


Name	EY729037
Unique Name	EY729037
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	883

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.045e-26
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 1

Query:  229 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA GV ++L P  V RC+D   IGFM +  +H AM
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAM 165

HSP 2 Score: 31.5722 bits (70), Expect = 1.045e-26
Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   +VG  ++ L   +A  L R G K   +     GL+E
Sbjct:  182 NMLGPLTNPAGVRHQIVGVFNQALCRPLAEVLLRLGSKHVLVVHSQDGLDE 232

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAE (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.045e-26
Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 1

Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D   +GFM +  +H AM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAM 161

HSP 2 Score: 31.5722 bits (70), Expect = 1.045e-26
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWL 847
            ++LGP+ NPA V   VVG   + L   +A  L+R G  EH L
Sbjct:  178 NMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLG-SEHVL 218

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAB (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.045e-26
Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 1

Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D   +GFM +  +H AM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAM 161

HSP 2 Score: 31.5722 bits (70), Expect = 1.045e-26
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWL 847
            ++LGP+ NPA V   VVG   + L   +A  L+R G  EH L
Sbjct:  178 NMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLG-SEHVL 218

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA8 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.045e-26
Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 1

Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D   +GFM +  +H AM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAM 161

HSP 2 Score: 31.5722 bits (70), Expect = 1.045e-26
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWL 847
            ++LGP+ NPA V   VVG   + L   +A  L+R G  EH L
Sbjct:  178 NMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLG-SEHVL 218

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.045e-26
Identity = 64/156 (41.03%), Postives = 87/156 (55.77%), Query Frame = 1

Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E ++ ++ ++DLT  E QA +  ++  +  +A + AFL+ +R K ET  EIVG  + M + A  V    D  VD  GTGGDG N  N+ST AS + AA G KVAK             D+LEA GV +DL PE V R VD   +GFM +  +H AM
Sbjct:    5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFMFAPAHHGAM 160

HSP 2 Score: 33.113 bits (74), Expect = 1.045e-26
Identity = 21/51 (41.18%), Postives = 26/51 (50.98%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGPM NPA V   V+G   + L   MA  L R G K   +     GL+E
Sbjct:  177 NILGPMANPAGVRHQVLGVFSKALCRPMAEVLSRLGSKHVLVVHAQDGLDE 227

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.046e-26
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1

Query:  235 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H AM
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAM 160

HSP 2 Score: 28.4906 bits (62), Expect = 1.046e-26
Identity = 16/51 (31.37%), Postives = 29/51 (56.86%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   ++G      ++ +A  +R  G +  W+ + G GL+E
Sbjct:  177 NLLGPLSNPAGVRRQLLGVFSPQWLVPLAEVMRDLGSECVWV-VHGDGLDE 226

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.046e-26
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1

Query:  235 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H AM
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAM 160

HSP 2 Score: 28.4906 bits (62), Expect = 1.046e-26
Identity = 16/51 (31.37%), Postives = 29/51 (56.86%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   ++G      ++ +A  +R  G +  W+ + G GL+E
Sbjct:  177 NLLGPLSNPAGVRRQLLGVFSPQWLVPLAEVMRDLGSECVWV-VHGDGLDE 226

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.360e-26
Identity = 69/155 (44.52%), Postives = 93/155 (60.00%), Query Frame = 1

Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  GAKV K             DVLE LG+ + L P+ V    +EA I    + K+HPA+
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEAGITICFAVKFHPAL 173

HSP 2 Score: 22.3274 bits (46), Expect = 1.360e-26
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVG 775
            ++LGP+ NPA V    VG
Sbjct:  190 NVLGPLTNPARVKAQAVG 207

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.360e-26
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 1

Query:  229 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D   IGFM +  +H AM
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAM 161

HSP 2 Score: 32.7278 bits (73), Expect = 1.360e-26
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   VVG   + L   +A  L+R G K   +     GL+E
Sbjct:  178 NMLGPLTNPAGVKHQVVGVFSQALCRPLAEVLQRMGSKHVLVVHSKDGLDE 228

[Close]

BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.360e-26
Identity = 65/160 (40.62%), Postives = 85/160 (53.12%), Query Frame = 1

Query:  244 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            DL+E E    ++ +++ E   A I +F+  LR KGET  EI G AR M + AT +    + +DI               VGTGGDG NT NIST  S + +ACG KVAK             DVLE LGV +D+ PE V RC++E  IGF+ +   H AM
Sbjct:   14 DLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAM 173

HSP 2 Score: 34.2686 bits (77), Expect = 1.360e-26
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 2

Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGP+ NPA     V+G   E LV +MA  L   G K  ++     G++E
Sbjct:  190 NILGPLTNPANADCQVMGVYREELVAKMAGVLHHLGCKRGFVVHGRDGMDE 240

The following BLAST results are available for this feature:

BLAST of EY729037 vs. ExPASy Swiss-Prot

BLAST of EY729037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
TRPD_PSEU2	1.045e-26	42.11	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_PSEAE	1.045e-26	40.79	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_PSEAB	1.045e-26	40.79	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_PSEA8	1.045e-26	40.79	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_PSEU5	1.045e-26	41.03	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_RHIEC	1.046e-26	43.92	Anthranilate phosphoribosyltransferase OS=Rhizobiu...	[more]
TRPD_RHIE6	1.046e-26	43.92	Anthranilate phosphoribosyltransferase OS=Rhizobiu...	[more]
TRPD_STRAW	1.360e-26	44.52	Anthranilate phosphoribosyltransferase OS=Streptom...	[more]
TRPD_PSEFS	1.360e-26	39.47	Anthranilate phosphoribosyltransferase OS=Pseudomo...	[more]
TRPD_GEOLS	1.360e-26	40.63	Anthranilate phosphoribosyltransferase OS=Geobacte...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C3-704-011-G05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY729037 ID=EY729037; Name=EY729037; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGA
AGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGAT
GGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGC
TTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCAT
GTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGAC
CCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCANGAATTGGTTTCATGAT
GTCGACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAA
AGCTCAAAGTAAAACTGTATTCATATATTGGGTCCTATGTTGAATCCTGC
ATGTGTGCCATTCGCTGTGGTTGGTGGTTTACATGAAAACTTGGTACTCC
AAATGGCCCATGCCCTGCGACGATTTGGCCTGAAAGAGCATTGGTTGTTC
CTCAAAGGGTTTGGATTAAATGAGTCCCCTGGG