EY729037

Overview
NameEY729037
Unique NameEY729037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.361e-26
Identity = 64/157 (40.76%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  208 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            F  +I  L     L  AEA+A+ + +++ EA +A I AFL+ LR +GET  EI   A  M + A +V    +A+DIVGTGGDG  T NIST  +++ AA G  VAK             D L+ALGV +D+DP  +   +++A IGFM +  +H AM
Sbjct:    4 FKTIIARLAEGRALDAAEARAAFEIVMSGEATQAQIGAFLMGLRVRGETVAEITAGATVMRERALRVTAPANAIDIVGTGGDGVGTWNISTATALVVAAAGVPVAKHGNRKASSLSGTADALQALGVNLDIDPATIAASIEKAGIGFMFAQAHHAAM 160          

HSP 2 Score: 31.5722 bits (70), Expect = 1.361e-26
Identity = 17/51 (33.33%), Postives = 25/51 (49.02%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   ++G      V   A ALR  G    W+     G++E
Sbjct:  177 NMLGPLSNPALVKRQLLGVFAAEWVKPFAEALRNLGSDSAWVVHGSDGMDE 227          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.361e-26
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  235 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EA +GFM +  +H AM
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQLHHSAM 160          

HSP 2 Score: 26.5646 bits (57), Expect = 1.361e-26
Identity = 15/51 (29.41%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ +PA V   ++G      ++ +A  +R  G +  W+ + G GL+E
Sbjct:  177 NLLGPLSSPAGVRRQLLGVFSPQWLVPLAEVMRDLGSECVWV-VHGDGLDE 226          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.770e-26
Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  283 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +  E    +++A +  LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++  +GFM +  +HPAM
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFMFAPNHHPAM 167          

HSP 2 Score: 33.113 bits (74), Expect = 1.770e-26
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKG 859
            ++LGP+ NPA  P  ++G  H +LV     AL+R G  EH + + G
Sbjct:  184 NLLGPLTNPAGAPNILMGVFHPDLVGIQVRALQRLG-AEHAVVVYG 228          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.770e-26
Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E  IGF+ +   H AM
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAM 173          

HSP 2 Score: 36.965 bits (84), Expect = 1.770e-26
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            +ILGP+ NPA     V+G   E+LV ++AH L+  G K  ++     G++E
Sbjct:  190 NILGPLTNPAGAGCQVLGVYREDLVEKLAHVLKNLGCKRGFVVHGQDGMDE 240          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.771e-26
Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D   +GFM +  +H AM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAM 161          

HSP 2 Score: 31.5722 bits (70), Expect = 1.771e-26
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWL 847
            ++LGP+ NPA V   VVG   + L   +A  L+R G  EH L
Sbjct:  178 NMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLG-SEHVL 218          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPW (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain W619) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.771e-26
Identity = 62/152 (40.79%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D   IGFM +  +H AM
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVGRCIDSLGIGFMFAQSHHSAM 161          

HSP 2 Score: 32.7278 bits (73), Expect = 1.771e-26
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   VVG   + L   +A  L+R G K   +     GL+E
Sbjct:  178 NMLGPLTNPAGVKHQVVGVFSQALCRPLAEVLQRLGSKHVLVVHSKDGLDE 228          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_DEHSC (Anthranilate phosphoribosyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.771e-26
Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++  IGFM +  +HPAM
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFMFAPVFHPAM 158          

HSP 2 Score: 27.7202 bits (60), Expect = 1.771e-26
Identity = 14/46 (30.43%), Postives = 24/46 (52.17%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVG----GLHENLVLQMAHALRRFGLKEHWL 847
            +ILGP+ NPA   + ++G    GL + ++  + H   +  L  H L
Sbjct:  175 NILGPLTNPASAQYQLIGVPEIGLGDKIISALCHMDIKHALVVHGL 220          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_DEHE1 (Anthranilate phosphoribosyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.771e-26
Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++  IGFM +  +HPAM
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFMFAPVFHPAM 158          

HSP 2 Score: 27.7202 bits (60), Expect = 1.771e-26
Identity = 14/46 (30.43%), Postives = 24/46 (52.17%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVG----GLHENLVLQMAHALRRFGLKEHWL 847
            +ILGP+ NPA   + ++G    GL + ++  + H   +  L  H L
Sbjct:  175 NILGPLTNPASAQYQLIGVPEIGLGDKIISALCHMDIKHALVVHGL 220          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.772e-26
Identity = 62/144 (43.06%), Postives = 81/144 (56.25%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            LT  EA  + + L++ EA  A I  FL+ LR +GET  EIVG    M +    V    D++DIVGTGGDG  T NIST A+++ A  G  VAK             D L ALGV +D+DP  + RC+ EA +GFM +  +H AM
Sbjct:   17 LTRDEAADAFNILMSGEATPAQIGGFLIALRMRGETVPEIVGAVTVMRQKMLPVIAPTDSIDIVGTGGDGTGTYNISTLAALIVAGAGVPVAKHGNKALSSKSGAADSLTALGVKLDIDPSVIGRCISEAGVGFMFAQLHHSAM 160          

HSP 2 Score: 32.3426 bits (72), Expect = 1.772e-26
Identity = 18/51 (35.29%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   ++G      V+ +A  LR  G +  W+ + G GL+E
Sbjct:  177 NLLGPLANPAGVKKQLLGVYAPEWVIPLAETLRDLGSESIWV-VHGNGLDE 226          
BLAST of EY729037 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.305e-26
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAXIGFMMSTKYHPAM 675
            ++  +DL+  E ++ + + +  +  +A I AF++ +R K E+  EIVG   AM + A +VE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D   IGFM +  +H AM
Sbjct:   10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAM 161          

HSP 2 Score: 32.3426 bits (72), Expect = 2.305e-26
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 2
Query:  722 HILGPMLNPACVPFAVVGGLHENLVLQMAHALRRFGLKEHWLFLKGFGLNE 874
            ++LGP+ NPA V   VVG   + L   +A  L+R G K   +     GL+E
Sbjct:  178 NMLGPLTNPAGVKHQVVGVFTQALCRPLAEVLQRLGSKHVLVVHSQDGLDE 228          
The following BLAST results are available for this feature:
BLAST of EY729037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PARL11.361e-2640.76Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_RHILW1.361e-2644.59Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHOFD1.770e-2642.11Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]
TRPD_GEOUR1.770e-2637.58Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_PSEA71.771e-2640.79Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPW1.771e-2640.79Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_DEHSC1.771e-2641.94Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_DEHE11.771e-2641.94Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_AGRVS1.772e-2643.06Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_PSEF52.305e-2638.82Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-G05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729037 ID=EY729037; Name=EY729037; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGA
AGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGAT
GGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGC
TTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCAT
GTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGAC
CCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCANGAATTGGTTTCATGAT
GTCGACNAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAA
AGCTCAAAGTAAAACTGTATTCATATATTGGGTCCTATGTTGAATCCTGC
ATGTGTGCCATTCGCTGTGGTTGGTGGTTTACATGAAAACTTGGTACTCC
AAATGGCCCATGCCCTGCGACGATTTGGCCTGAAAGAGCATTGGTTGTTC
CTCAAAGGGTTTGGATTAAATGAGTCCCCTGGG
back to top