EY729026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METTH (50S ribosomal protein L3P OS=Methanobacterium thermoautotrophicum GN=rpl3p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.345e-19 Identity = 64/203 (31.53%), Postives = 95/203 (46.80%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQI 624 + PR GS+ F PRKRAAR +VK++P+ D+P L A GYKAGMTH++ + S E VTI+E Y KT RGL++L V A +++RR+ Y+ + + I++ +E Y + VRV+ HT R + + +KK + E G T EK +YA K + Sbjct: 3 RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRKL------------TPPADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFECGLGGKTPEEKFEYALEILGKDV 184 HSP 2 Score: 24.6386 bits (52), Expect = 3.345e-19 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 681 KVKGNKGVVPRWGVTXFLARSQRSS 755 K KG +G V RWG+ ++ RSS Sbjct: 203 KGKGFQGPVKRWGIRIQYGKAARSS 227 HSP 3 Score: 21.1718 bits (43), Expect = 3.345e-19 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 659 IDIIGVTKGKG 691 +D I VTKGKG Sbjct: 196 VDAIAVTKGKG 206
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METVS (50S ribosomal protein L3P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl3p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P S + +E VT++ET Y KT +GL++L VWA+ +E+ R+ + E + +S+ A LEK +RV+ HT K G+ +KK ++EI+ G ++AEK+ YA K + ++ V Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL--------------TVTKKEEIKTVESLDAVLEKTVD----LRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDV 188 HSP 2 Score: 21.1718 bits (43), Expect = 1.449e-18 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 + ID + VTKGKG Sbjct: 193 EFIDTLAVTKGKG 205
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METVA (50S ribosomal protein L3P OS=Methanococcus vannielii GN=rpl3p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P S + +E VT++ET Y KT +GL++L VWA+ +E+ R+ + E + +S+ A LEK +RV+ HT K G+ +KK ++EI+ G ++AEK+ YA K + ++ V Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL--------------TVTKKEEIKTVESLDAVLEKTVD----LRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDV 188 HSP 2 Score: 21.1718 bits (43), Expect = 1.449e-18 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 + ID + VTKGKG Sbjct: 193 EFIDTLAVTKGKG 205
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METM5 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl3p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 66/207 (31.88%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P S + +E VT++ET Y KT +GL++L VWA+ L ++ R+ E KK+ A L+ + + A+ VR + HT K G+ +KK ++EI+ G ++AE++ YA K + + V Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKL-----------------TLAKKEEKKTADA-LDAVVEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAIGDV 188 HSP 2 Score: 21.1718 bits (43), Expect = 1.449e-18 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 ++ID + +TKGKG Sbjct: 193 EIIDTLAITKGKG 205
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METM6 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl3p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.884e-18 Identity = 66/207 (31.88%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P S + +E VT++ET Y KT +GL++L VWA+ L ++ R+ E KK+ A L+ + + A+ VR + HT K G+ +KK ++EI+ G ++AE++ YA K + + V Sbjct: 4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPKSPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKL-----------------TLVKKEEKKTADA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDV 188 HSP 2 Score: 21.1718 bits (43), Expect = 1.884e-18 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 ++ID + +TKGKG Sbjct: 193 EIIDTLAITKGKG 205
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METJA (50S ribosomal protein L3P OS=Methanocaldococcus jannaschii GN=rpl3p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.141e-18 Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 PR GSL F PRKRA R +++++P++D RL AF YKAGM+H + P S +E +TI+E Y + R L +L VWA +L +E+ R+ + E +K+++ LE +K VRVL HT K+ L +KK ++EI+ G I E+++YA KQ+ + V Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEED---TVRLQAFPVYKAGMSHAFIKEDNPKSPNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----------------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDV 189 HSP 2 Score: 25.0238 bits (53), Expect = 4.141e-18 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG 691 + +++D IGVTKGKG Sbjct: 192 EGELVDTIGVTKGKG 206
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_SULTO (50S ribosomal protein L3P OS=Sulfolobus tokodaii GN=rpl3p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-17 Identity = 61/212 (28.77%), Postives = 102/212 (48.11%), Query Frame = 1 Query: 13 HRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYAS---VVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 HRK PR GS G PRKRA+ +++P ++P +L F+GYK GM+HI +KP S + KE V++IET YV P+G + T + +SE++ + + + + D K+ ++ +L++I + +RVL TQ + + L +KK ++E+Q GG I +++Y K + V V Sbjct: 3 HRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMIDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLIQQR-----------KVTRLKID--KEKMKGKLDEINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEVQVGGGDIKSQLNYVLNILGKPLSVKDV 200 HSP 2 Score: 28.1054 bits (61), Expect = 1.183e-17 Identity = 15/30 (50.00%), Postives = 18/30 (60.00%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG**RCGPPLGCYRLPR 736 + ++IDIIGVTKGKG G LPR Sbjct: 203 EGQLIDIIGVTKGKGFQGVVKRYGVVELPR 232
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.712e-17 Identity = 66/208 (31.73%), Postives = 95/208 (45.67%), Query Frame = 1 Query: 13 HRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQL-EKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPV 630 HRK PR GS G PRKRA K +P + +P +L F+GYKAGMTH+ +KP S + KE VTI+E+ Y +G L L WA EE ++ K + D K + L +K + +R+L TQ + L +K+ ++EIQ GG+I ++++Y KQIPV Sbjct: 3 HRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYLKR-----------KITSLKVDSSKMKEKLDLIQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPV 196 HSP 2 Score: 25.409 bits (54), Expect = 5.712e-17 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG 691 + ++ DIIGVTKGKG Sbjct: 202 EGQLTDIIGVTKGKG 216
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_NATPD (50S ribosomal protein L3P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl3p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16 Identity = 57/190 (30.00%), Postives = 94/190 (49.47%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 PR GS+GF PR RAA + ++P DD +P L F GYKAGM+H+V ++P S +E VT++ET Y TP G R L VW + E++ R + ++ + + I+ L+ + + VRV+ HT + + +K+ +ME + GG+++++VD+A Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQP-GLQGFAGYKAGMSHVVAINDEPNSPREGQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSL--------------SVPEEQSGDIEGDIRTALD--EGALADVRVITHTVPGALSSVPKKEPDVMETRVGGGSLSDRVDFA 178
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_HALSA (50S ribosomal protein L3P OS=Halobacterium salinarium GN=rpl3p PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16 Identity = 58/190 (30.53%), Postives = 85/190 (44.74%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K + ET VT++ET Y TP G + L VWA E + R DEG + + + + +RV+ HT G+ +K +ME + GGT+A+++++A Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL------------------SVPDEGGDTDELIEALDTEEIADIRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFA 176 The following BLAST results are available for this feature:
BLAST of EY729026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729026 ID=EY729026; Name=EY729026; organism=Citrus sinensis; type=EST; length=875bpback to top |