EY729026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_HALS3 (50S ribosomal protein L3P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16 Identity = 58/190 (30.53%), Postives = 85/190 (44.74%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K + ET VT++ET Y TP G + L VWA E + R DEG + + + + +RV+ HT G+ +K +ME + GGT+A+++++A Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL------------------SVPDEGGDTDELIEALDTEEIADIRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFA 176
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METKA (50S ribosomal protein L3P OS=Methanopyrus kandleri GN=rpl3p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.797e-16 Identity = 56/200 (28.00%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQI 624 PR GSL F PRKRA+R +++++P ++ R+ F GYKAGMTH + + P S +E VTI++ Y TP G R + WA+ E R + +G+ ++E++ V +RV+ TQ +K G+ +KK +ME + G + E+ +YA ++I Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVFT-----------------VPKDGEAGDLDKIEELVDEGIVEEIRVIVATQPKK-AGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEI 190 HSP 2 Score: 27.7202 bits (60), Expect = 7.797e-16 Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 669 SVSRKVKGNKGVVPRWGVTXFLARSQR 749 S K KG +GVV RWGVT ++QR Sbjct: 205 SAITKGKGFQGVVKRWGVTIQDRKTQR 231 HSP 3 Score: 21.1718 bits (43), Expect = 7.797e-16 Identity = 6/15 (40.00%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG 691 + +++D+ +TKGKG Sbjct: 198 EGEIVDVSAITKGKG 212
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_CALMQ (50S ribosomal protein L3P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl3p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.861e-16 Identity = 63/209 (30.14%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP--RGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ-GHGGTIAEKVDYAYGFFXKQI-PVD 633 K PR GS+ + PRKRA+ +++ +P D KP L F+GYKAGM H+ ++ S KE +AVT++ET Y P L S+ W ++ EVR+ + +++TD+ +Q L+ + S ++V+A TQ K G+ +K ++EI G TI E+ YA G K++ P D Sbjct: 4 KIHRPRRGSMAYYPRKRASDIVPRIRNWPVIDLGKPT-LLGFVGYKAGMVHVTVVDDRKTSPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSVGEAWV-NIPNEVRKYIARR--------IPTLPEKFDTDKALADLQGLLDSV----SYIKVIAMTQPYK-AGVGKKTPEVLEIPVGGVPTIDEQFKYASGLLGKEVKPTD 197 HSP 2 Score: 26.5646 bits (57), Expect = 7.861e-16 Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG**RCGPPLGCYRLPR 736 +++D+IGVTKGKG G LPR Sbjct: 203 QLVDVIGVTKGKGTQGVIKRFGVKELPR 230
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_THEGJ (50S ribosomal protein L3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.862e-16 Identity = 69/212 (32.55%), Postives = 93/212 (43.87%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFY---KNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 K PR GSL F PRKRA ++K +PKD R+ F GYKAGMTHI+ + PG KE VTI+E Y + GL + VW L++ V+RR KN+ +E K+ QLE + + VR+L HTQ +K +KK +ME G + K +YA K+I V Sbjct: 3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKD---SEVRMLGFAGYKAGMTHILMIDDSPG-LTKGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRIKTLPKNY----------------GEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEV 192 HSP 2 Score: 23.8682 bits (50), Expect = 7.862e-16 Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG 691 + +++D+I VTKGKG Sbjct: 195 EGELLDVIAVTKGKG 209
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5) HSP 1 Score: 83.1889 bits (204), Expect = 7.866e-16 Identity = 55/192 (28.65%), Postives = 85/192 (44.27%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 PR GSLGF PRKR+ + ++P DD + F GYKAGMTH+V ++P S E VT+IET Y TP G R L VW E+ R D + + Q+ + + +R++ HT + + +KK +ME + GG++++++D+A Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQ--GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL-----------------DVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHA 179 HSP 2 Score: 21.9422 bits (45), Expect = 7.866e-16 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 662 DIIGVTKGKG 691 D+ GVTKGKG Sbjct: 202 DVAGVTKGKG 211
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16 Identity = 57/212 (26.89%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 4 ASAHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 A+ HR PR GSL F PRKRA +++++ D+ + + F GYKAGMTH++ ++P S E VT++E Y G+R +WA++LS+++ R + + I+++++++ + +RVLAHT R + G+ +K +MEI G ++ E++ A G Q+ V + Sbjct: 2 ATIHR----PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTEGMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--------------TIPKARRGASLEDIESRVDELCE----IRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVEEQLKAAEGLLGSQVAVSNI 188 HSP 2 Score: 20.7866 bits (42), Expect = 7.868e-16 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 659 IDIIGVTKGKG 691 ID+ VTKGKG Sbjct: 195 IDVSAVTKGKG 205
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_PYRIL (50S ribosomal protein L3P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl3p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.012e-15 Identity = 64/215 (29.77%), Postives = 96/215 (44.65%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKAHLMEIQ-GHGGTIAEKVDYAYGFFXKQIPVDAVST 645 K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P S L+ KE +AVT+++ Y P RS+ VWA L +RR T K + Q++K++++ V VR L TQ + G+ +K L+EI G ++ E++ +A K + V T Sbjct: 8 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRRVL--------------------TLPEKVDVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFT 200 HSP 2 Score: 23.8682 bits (50), Expect = 1.012e-15 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 +++D+I VTKGKG Sbjct: 203 QLVDVIAVTKGKG 215 HSP 3 Score: 21.9422 bits (45), Expect = 1.012e-15 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 681 KVKGNKGVVPRWGVT 725 K KG +GV+ R+GVT Sbjct: 212 KGKGYQGVIKRFGVT 226
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_THENV (50S ribosomal protein L3P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl3p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.696e-15 Identity = 63/215 (29.30%), Postives = 94/215 (43.72%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKAHLMEIQ-GHGGTIAEKVDYAYGFFXKQIPVDAVST 645 K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P S L+ KE VT+++ Y P RS+ VWA L +RR T K + Q++K++++ V VR L TQ + G+ +K L+EI G ++ E++ +A K + V T Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL--------------------TLPEKADVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFT 196 HSP 2 Score: 23.8682 bits (50), Expect = 1.696e-15 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 +++D+I VTKGKG Sbjct: 199 QLVDVIAVTKGKG 211 HSP 3 Score: 21.9422 bits (45), Expect = 1.696e-15 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 681 KVKGNKGVVPRWGVT 725 K KG +GV+ R+GVT Sbjct: 208 KGKGYQGVIKRFGVT 222
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_PYRAR (50S ribosomal protein L3P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl3p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.194e-15 Identity = 66/215 (30.70%), Postives = 95/215 (44.19%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKAHLMEIQ-GHGGTIAEKVDYAYGFFXKQI-PVDAVS 642 K PR GS+G PRKRAA +V+ +P + KP L F YKAGM H V ++P S L+ KE +AVT+++ Y P LRS VWA L + + R T K + Q++++++Y V VR L TQ + G+ +K L+EI G I E++ +A K + P D S Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL--------------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQ-PHLSGIGKKTPELLEIPIGGVPNIDERIKFAISLLGKTVSPKDVFS 196 HSP 2 Score: 23.8682 bits (50), Expect = 2.194e-15 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 653 KMIDIIGVTKGKG 691 +++D+I VTKGKG Sbjct: 199 QLVDVIAVTKGKG 211 HSP 3 Score: 21.557 bits (44), Expect = 2.194e-15 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 681 KVKGNKGVVPRWGVT 725 K KG +GVV R+GVT Sbjct: 208 KGKGWQGVVKRFGVT 222
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_SULSO (50S ribosomal protein L3P OS=Sulfolobus solfataricus GN=rpl3p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.242e-15 Identity = 62/216 (28.70%), Postives = 95/216 (43.98%), Query Frame = 1 Query: 13 HRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNT-VWAQHLSE--EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQ----AQLEKIKKYASVV---RVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPV 630 HRK PR GS G PRKR++ + +P+ + P +L F+GYK GMTH+ + P S + KE VT++E Y +G ++ T W+ + ++ RR + + DE KK +L+ IK + R+L TQ RK+ L +K L+EIQ GG ++DYA K+I + Sbjct: 3 HRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHS------------ISSFLKDDESKKKFDERFNTKLDLIKSNLDRIVYFRLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITI 205 HSP 2 Score: 26.5646 bits (57), Expect = 2.242e-15 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 647 DDKMIDIIGVTKGKG 691 + ++ID++GVTKGKG Sbjct: 211 EGQLIDVVGVTKGKG 225 The following BLAST results are available for this feature:
BLAST of EY729026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729026 ID=EY729026; Name=EY729026; organism=Citrus sinensis; type=EST; length=875bpback to top |