EY729026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12 Identity = 74/276 (26.81%), Postives = 114/276 (41.30%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWA------QHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPV----------DAVSTX**DDXXXXXXXXXXVIKVWSPVGVLPXSSPDPKGLR*GACIGAWHPARFL 798 K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG + KE VTIIET Y + GL + V ++S++ + R + + Y D+ ++ + LE + K +V V A + +KK +ME G ++ EK +Y K++ V D ++ +K W G+ + D KG R IG WHPAR + Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG-LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRKF-TFYQLLKRRIATLPKNYTKDDFEQKL-GNLEDMIKEGEIVEVRALVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAV-------TKGKGTQGPVKRW---GIKLRAHKDSKGRRKVGSIGPWHPARVM 262
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_UNCMA (50S ribosomal protein L3P OS=Uncultured methanogenic archaeon RC-I GN=rpl3p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12 Identity = 60/206 (29.13%), Postives = 94/206 (45.63%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSE-EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 PR GSLG+ PR RA + K++ + + D P ++ F+G+KAGM+HIV ++P S E VTI+E Y +P G + + W L E KN Y+TDE I A+L K K + +RV+ T ++ G+ +K LME + GG +A++ ++A K + + V Sbjct: 7 PRRGSLGYSPRVRARSQKPKMRNWAELGDQP----KIQGFVGFKAGMSHIVMVDDRPHSATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKN--------------GYKTDEQLAKI-AELVK-KGVVADLRVMTVTLTSEVSGIPKKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDV 192
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12 Identity = 57/212 (26.89%), Postives = 91/212 (42.92%), Query Frame = 1 Query: 4 ASAHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 AS HR P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IET Y + G +++ WA L E++RR EG ++I +E+ + S +R + +T + + G+ +K +ME + K +YA + V V Sbjct: 2 ASIHR----PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRI-------------PIPAAGNQAEGLENIGKLIEEGR--VSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDV 192
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METBF (50S ribosomal protein L3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl3p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 58/199 (29.15%), Postives = 86/199 (43.22%), Query Frame = 1 Query: 4 ASAHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 AS HR P+ GSL F PRKRA H + +A+P + + RL F GYK GMTH++ + S E VTIIET Y + G +++ VWA L E++RR E +I +E+ K S +R + +T + + G+ +K +ME + K +YA Sbjct: 2 ASIHR----PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRI-------------PVPKGDNMAETLGNIGKMIEEGK--VSDIRAVTYTLPKSLTGVPKKTPDIMESGISARDLNTKFEYA 179
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11 Identity = 74/272 (27.21%), Postives = 106/272 (38.97%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQ--HLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPV----------DAVSTX**DDXXXXXXXXXXVIKVWSPVGVLPXSSPDPKGLR*GACIGAWHPARFL 798 + PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG KE VTI+E Y + GL + V L +R + T+E + +LE + K VV + A + +KK +ME G +I EK +Y K+I V D V+ +K W GV S D KG R A IG WHPAR + Sbjct: 3 RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG-LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLENYPSKRAKNVTFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVELRALVATQPWLARIKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAV-------TKGKGTQGPVKRW---GVKLTSHKDSKGRRKVATIGPWHPARVM 260
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METAC (50S ribosomal protein L3P OS=Methanosarcina acetivorans GN=rpl3p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11 Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 4 ASAHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRR 357 AS HR P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IET Y + G +++ VWA L E++RR Sbjct: 2 ASIHR----PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR 113
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11 Identity = 52/203 (25.62%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 31 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYAYGFFXKQIPVDAV 639 PR GS+GF PRKRA+R ++K +PK + KP AF YK GMTH + ++ + + VT++E Y K L+ +++++ L + V R+ K Y +E K+ ++ + A V+++ TQ K+K +K + +I G + +K++YA K++ ++ V Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKP---LAFAAYKVGMTHTILNI-------NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------------LKNYNFEEKKEQFLSKADN----ADEVKIIVSTQPWKIK--LKKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDV 182
BLAST of EY729026 vs. ExPASy Swiss-Prot
Match: RL3_METBU (50S ribosomal protein L3P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl3p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11 Identity = 52/199 (26.13%), Postives = 82/199 (41.21%), Query Frame = 1 Query: 19 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKY-----ASVVRVLAHTQIRKMKGLKQKKAHLMEIQGHGGTIAEKVDYA 600 K PR GSL + PRKR+ H + +++P+ D +L F GYK GMTH++ + S E VTIIET Y K G ++ W L +++ RR + A LEK++ A+ +R++ +T + G+ +K +ME G + K +YA Sbjct: 3 KGHRPRRGSLAYSPRKRSQSHIPRFRSWPESDAEP--KLQGFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRRL--------------------KTAKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVPDVMETGVSGSDVKAKFEYA 179 The following BLAST results are available for this feature:
BLAST of EY729026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729026 ID=EY729026; Name=EY729026; organism=Citrus sinensis; type=EST; length=875bpback to top |