EY728929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_THENV (Probable exosome complex exonuclease 1 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1381 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 243 TRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 TR A + AA+LAL DAGI MRD+V S G ++ T +LDLN +ED G D+ VG +P L + TLLQ+D + + + LA++G + V R+ L Sbjct: 134 TRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLDLNGLEDQYGEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEALNLAVKGAEFVYQKARDAL 232
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_PYRAR (Probable exosome complex exonuclease 1 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1937 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 243 TRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 TR A + AA+LAL DAGI MRD+V S G ++ +LDLN +ED+ G D+ VG +P L + LLQ+D F + LA++G + V R+ L Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGVVVLDLNGLEDNYGEGDLPVGYMPNLKRFVLLQLDGAWKREVFLQALNLAVKGAEYVYQIARDAL 232
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_METMA (Probable exosome complex exonuclease 1 OS=Methanosarcina mazei GN=MM_2623 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13 Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 GTR+A INA+++AL DAGIPM+ ++TSC+ G ++ +LDLN ED+ G D V + ++TL+QMD L + + ++L +GCK + + VL Sbjct: 135 GTRTAAINASSIALADAGIPMKGLITSCAFGKVDGKIVLDLNKEEDNYGEADFPVAMTQD-GEITLIQMDGNLTPDEIKQGLELVKKGCKEILEIQQAVL 233
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_SULTO (Probable exosome complex exonuclease 1 OS=Sulfolobus tokodaii GN=ST0443 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTKQLE 563 GTR + AA++AL DAGIPMRD++ + G + +LDLN ED G D+ V ++P+L +V LLQ++ + F +++A +G + + N +E + +L+ Sbjct: 138 GTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLDLNEPEDMWGEADMPVAMMPSLKQVALLQLNGNMTPQEFRQALEMAQKGIETIYNLEKEAIRSKYAELK 245
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: RRP41_SCHPO (Exosome complex component ski6 OS=Schizosaccharomyces pombe GN=ski6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12 Identity = 40/102 (39.22%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 249 SACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTK 554 ++CINA TLAL DAGIP++D V +AG + S LLDLN +E+SA +TV +L + KV +Q++ + + E VM +AI G + + N ++ + ++ K Sbjct: 135 ASCINATTLALIDAGIPVKDFVCCSTAGIVESDMLLDLNSLEESALS-WLTVAVLGNIKKVVYMQLETSMHLDYLESVMNMAIAGSEHIYNTMQSAVRQSAK 235
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_SULAC (Probable exosome complex exonuclease 1 OS=Sulfolobus acidocaldarius GN=Saci_0610 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12 Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 GTR + AA++AL DAGIPMRD++ + G + + +LDLN ED G D+ + +LP+L +V LLQ++ + + F +LA +G ++ +E L Sbjct: 134 GTRLVALMAASMALADAGIPMRDLIAGVAVGKADGSLVLDLNEQEDMWGEADMPIAVLPSLGQVVLLQLNGFMTPDEFRRAFELAQKGISSIYALQKEAL 233
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: RRP41_YEAST (Exosome complex component SKI6 OS=Saccharomyces cerevisiae GN=SKI6 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTKQ 557 G + IN TLAL DAGI M D ++ S G ++TPLLD N +E++A VT+G++ +K++LL ++ K+P + E+V+ + I G V + + E L ++ ++ Sbjct: 134 GIMGSLINGITLALIDAGISMFDYISGISVGLYDTTPLLDTNSLEENAMS-TVTLGVVGKSEKLSLLLVEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQK 238
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_AERPE (Probable exosome complex exonuclease 1 OS=Aeropyrum pernix GN=APE_1447 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 GTR+A + AA+LAL DAGIPMR +V + G + ++D++ +ED G D+ V P + ++TLLQ++ L F + +A+ V +E + Sbjct: 135 GTRTAAVTAASLALADAGIPMRALVGGVAVGKIQGVLVVDVDELEDMYGEADMPVAAAPDIGEITLLQLNGVLTGEEFRTALAMALRAIDRVVEMEKEAI 234 The following BLAST results are available for this feature:
BLAST of EY728929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728929 ID=EY728929; Name=EY728929; organism=Citrus sinensis; type=EST; length=895bpback to top |