EY728921

Overview
NameEY728921
Unique NameEY728921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728921 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 45/183 (24.59%), Postives = 84/183 (45.90%), Query Frame = 2
Query:   14 DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITYLDGRQLLI 559
            D+ + ++VS E+   GT K++++SR  I                         +V  +   P         C+ C G G+ I +   C  C G+  +++   L+V +  G+ NG+ I+  GE +       +GD+   ++ K HP FKR G+D+  E  ++ T+A  G +  +  LDG++ ++
Sbjct:  129 DLKYSMEVSFEEAAFGTEKEVTVSRLEICPTCSGSGTKPGHQPVTCRQCNGTGQVQYKQRTPFGQIVNVRTCDVCHGEGKIITNP--CETCGGKGRVRKHTKLKVRIPAGIDNGETISLRGEGEHGIKGGPSGDLFITIKVKPHPIFKRHGNDVNCEIPITFTQAALGAEIEVPTLDGKEKIV 309          
BLAST of EY728921 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSK (Chaperone protein dnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = 2
Query:  227 CNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITYLDGRQLLIKSQPXGSSQAG 592
            CN C+GTG+ I  K +C  C G+  ++++K + + V  G+ NGQ++   G+ +  A     GD+  V Q K H  F+R G+D++ E  L+  +   G +  +  L G+   +K +    +Q G
Sbjct:  185 CNYCEGTGKII--KQKCATCSGKGKVRKRKKINIQVPAGIDNGQQLRVAGQGEAGANGGPPGDLYVVFQVKPHEFFERDGEDIYCEVPLTFPQVALGDEIEVPTLTGK---VKLKIPAGTQTG 302          
BLAST of EY728921 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 35/123 (28.46%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  227 CNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITYLDGRQLLIKSQPXGSSQAG 592
            C+ C+GTG+ I  K++C  C G   ++++K + V +  G+ +GQ++  PG+ +   +    GD+  V   + H  F+R GDD++ E  L+  +A  G +  +  L G+   +K +    +Q G
Sbjct:  188 CHHCEGTGKII--KNKCSDCGGTGKVKKRKKINVTIPAGVDDGQQLRVPGQGEPGVNGGPAGDLFVVFHVRAHEFFERDGDDIYCEMPLTFAQAALGDEVEVPTLHGK---VKLKIPAGTQTG 305          
The following BLAST results are available for this feature:
BLAST of EY728921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 213
Match NameE-valueIdentityDescription
DNAJ_CLOTH8.337e-1124.59Chaperone protein dnaJ OS=Clostridium thermocellum... [more]
DNAJ_BACSK8.337e-1130.08Chaperone protein dnaJ OS=Bacillus clausii (strain... [more]
DNAJ_BACA28.337e-1128.46Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-D04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728921 ID=EY728921; Name=EY728921; organism=Citrus sinensis; type=EST; length=816bp
CACGCGTCCGGAGGATGTAATCCATCCCCTCAAGGTTTCTTTGGAGGATC
TCTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGC
ACCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTC
TGGCTGCCAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCT
CTATGATTCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGA
GAAACAATCAATGACAAGGATCGCTGCCCACAATGTAAGGGTGAGAAGGT
CATTCAGGAGAAAAAAGTCTTGGAGGTTATTGTTGAGAAGGGGATGCAAA
ATGGACAGAAGATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCGACACT
GTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCCGAAATT
TAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCACTGACAG
AAGCTCTCTGTGGCTTTCAATTTGTAATAACTTATTTGGATGGCCGGCAA
CTCCTCATCAAATCCCAGCCTGNNGGAAGTAGTCAAGCCGGACCAATTCA
AGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGG
GGCAAACTGTACATTCATTTCACTGTTGACTTCCCTGAGTCACTGAGCCC
AGACAGTGCAGATGCTGGAGACGTACTACTCCANGGACTCAGTCCACTCA
CGATTCGACTGGATGAACGTGGAAACAATCGAATAAACACTCCTGAGAAT
GAAGACCTCGGGGAGG
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