EY728916

Overview
NameEY728916
Unique NameEY728916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_AZOSB (Elongation factor P OS=Azoarcus sp. (strain BH72) GN=efp PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.204e-31
Identity = 76/163 (46.63%), Postives = 101/163 (61.96%), Query Frame = -1
Query:  150 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 638
            + KSGRN+A++K KLKNLLTG  +E VY ADDK + V LDRKE T S+ +               E+ AE++   L ++E+G++  CE +F+  + +SVELPTT+VR+V YTE + +GDTSGKVMKPAK+A G EL V            DTR    YK R K
Sbjct:   27 YNKSGRNAAVVKMKLKNLLTGAPSESVYKADDKFEVVQLDRKEVTYSYFADPMYVFMDADYEQF-EVEAENMTDALKYLEDGLQ--CEVVFYNGKAISVELPTTVVREVVYTEPAVKGDTSGKVMKPAKIATGFELPVPAFVEIGDKIEIDTRT-DEYKNRVK 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_DECAR (Elongation factor P OS=Dechloromonas aromatica (strain RCB) GN=efp PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.514e-30
Identity = 75/166 (45.18%), Postives = 102/166 (61.45%), Query Frame = -1
Query:  150 ES*FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRAK 647
            +S + KSGRN+A++K KLKNLLTG  +E VY ADDK + V+LD+KE T S+ +               E+ AE++   L ++E+G+   CE +F+  + +SVELP ++VR+V YTE + +GDTSGKVMKPAKLA G EL V            DTR    YK R K
Sbjct:   24 KSEYNKSGRNAAVVKMKLKNLLTGAASEAVYKADDKFEVVVLDKKEVTYSYFADPMYVFMDADYEQF-EVEAENMTDALKYLEDGL--ACEVVFYNGKAISVELPNSVVREVVYTEPAVKGDTSGKVMKPAKLATGFELPVPAFVSIGDKIEIDTRT-DEYKNRVK 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_CHRVO (Elongation factor P OS=Chromobacterium violaceum GN=efp PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.514e-30
Identity = 66/139 (47.48%), Postives = 97/139 (69.78%), Query Frame = -1
Query:  225 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGT-ELQV 638
            F+KSGRN++++K K+KNLLTG  +E VY ADDK D V+LDRK+ T S+ +               E+ A+++   + ++ +GMEDVC+  F++ + +SVELPTT++R+V YTE + RGDTSGKV+KPA+L   T E+QV
Sbjct:   27 FSKSGRNASVVKMKMKNLLTGAGSEAVYRADDKFDVVVLDRKDCTYSYFADPMYVFMDTEFNQY-EVEADNLGDTINYIVDGMEDVCQVTFYDGKAISVELPTTVIREVEYTEPAVRGDTSGKVLKPARLVGTTFEVQV 164          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_AERS4 (Elongation factor P OS=Aeromonas salmonicida (strain A449) GN=efp PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30
Identity = 75/144 (52.08%), Postives = 94/144 (65.28%), Query Frame = -1
Query:  222 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEA-----VLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVA 638
            F KSGRNSA++K KLK LL G  TE V+ ADDKLD V L+RKE T S+ S               E N  D+E      VL ++ +GMED+CE  F+ ++ +SVELPTTIVR+V YTE +ARGDTSGKV KPA+L  GT  ++A
Sbjct:   27 FNKSGRNSAVVKMKLKGLLNGSATETVFKADDKLDVVQLERKECTYSYFSDPLYVFMDT------EYNQYDVEKDNLGDVLNYLVDGMEDICEVTFYNEKAISVELPTTIVREVEYTEPAARGDTSGKVTKPARL-KGTAYELA 163          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_TOLAT (Elongation factor P OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=efp PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30
Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = -1
Query:  222 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVA 638
            F KSGRNSA++K K+KNLL+G   E V+ ADDKLD V L+RKE T S+ +               ++  E++  VL ++ +GMED+CE  F++ + +S+ELP TIVR+V YTE S RGDTSGKVMKPAKL  GT+  ++
Sbjct:   27 FNKSGRNSAVVKMKMKNLLSGAGAETVFKADDKLDTVQLERKECTYSYFADPMYVFMDTEYNQY-DIEKENLGDVLNYLIDGMEDICEVTFYDGKAISMELPITIVREVEYTEPSVRGDTSGKVMKPAKL-KGTDATIS 163          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_AERHH (Elongation factor P OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=efp PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30
Identity = 79/161 (49.07%), Postives = 97/161 (60.25%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEA-----VLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGT-ELQVAXXXXXXXXXXXDTREG 638
            F KSGRNSA++K KLK LL G  TE V+ ADDKL+ V L+RKE T S+ S               E N  D+E       L ++ +GMED+CE  F+ ++ +SVELPTTIVR+V YTE +ARGDTSGKV KPA+L   T EL VA           DTR G
Sbjct:   27 FNKSGRNSAVVKMKLKGLLNGSATETVFKADDKLEVVQLERKECTYSYFSDPLYVFMDT------EYNQYDVEKDNLGDALNYMVDGMEDICEVTFYNEKAISVELPTTIVREVEYTEPAARGDTSGKVTKPARLKGTTYELAVAAFVEIGDKIEIDTRTG 181          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_NEIMF (Elongation factor P OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=efp PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.815e-30
Identity = 73/155 (47.10%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + K GR+SA +  KLKNLLTG  +E +Y ADDK D VIL RK  T S+ +               E+ A++I   L F+ +GMED CE  F+E   +SVELPT IVR+V YTE + +GDTSGKVMK A+L  GTE+QV            DTR G
Sbjct:   27 YIKGGRSSAKVSMKLKNLLTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQY-EIEADNIGDALKFIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKIEIDTRTG 180          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_NEIMB (Elongation factor P OS=Neisseria meningitidis serogroup B GN=efp PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.815e-30
Identity = 73/155 (47.10%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + K GR+SA +  KLKNLLTG  +E +Y ADDK D VIL RK  T S+ +               E+ A++I   L F+ +GMED CE  F+E   +SVELPT IVR+V YTE + +GDTSGKVMK A+L  GTE+QV            DTR G
Sbjct:   27 YIKGGRSSAKVSMKLKNLLTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQY-EIEADNIGDALKFIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKVEIDTRTG 180          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_NEIMA (Elongation factor P OS=Neisseria meningitidis serogroup A GN=efp PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.815e-30
Identity = 73/155 (47.10%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + K GR+SA +  KLKNLLTG  +E +Y ADDK D VIL RK  T S+ +               E+ A++I   L F+ +GMED CE  F+E   +SVELPT IVR+V YTE + +GDTSGKVMK A+L  GTE+QV            DTR G
Sbjct:   27 YIKGGRSSAKVSMKLKNLLTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQY-EIEADNIGDALKFIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKIEIDTRTG 180          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_NEIM0 (Elongation factor P OS=Neisseria meningitidis serogroup C (strain 053442) GN=efp PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.815e-30
Identity = 73/155 (47.10%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + K GR+SA +  KLKNLLTG  +E +Y ADDK D VIL RK  T S+ +               E+ A++I   L F+ +GMED CE  F+E   +SVELPT IVR+V YTE + +GDTSGKVMK A+L  GTE+QV            DTR G
Sbjct:   27 YIKGGRSSAKVSMKLKNLLTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQY-EIEADNIGDALKFIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKVEIDTRTG 180          
The following BLAST results are available for this feature:
BLAST of EY728916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
EFP_AZOSB5.204e-3146.63Elongation factor P OS=Azoarcus sp. (strain BH72) ... [more]
EFP_DECAR1.514e-3045.18Elongation factor P OS=Dechloromonas aromatica (st... [more]
EFP_CHRVO1.514e-3047.48Elongation factor P OS=Chromobacterium violaceum G... [more]
EFP_AERS41.978e-3052.08Elongation factor P OS=Aeromonas salmonicida (stra... [more]
EFP_TOLAT4.406e-3049.64Elongation factor P OS=Tolumonas auensis (strain D... [more]
EFP_AERHH4.406e-3049.07Elongation factor P OS=Aeromonas hydrophila subsp.... [more]
EFP_NEIMF9.815e-3047.10Elongation factor P OS=Neisseria meningitidis sero... [more]
EFP_NEIMB9.815e-3047.10Elongation factor P OS=Neisseria meningitidis sero... [more]
EFP_NEIMA9.815e-3047.10Elongation factor P OS=Neisseria meningitidis sero... [more]
EFP_NEIM09.815e-3047.10Elongation factor P OS=Neisseria meningitidis sero... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728916 ID=EY728916; Name=EY728916; organism=Citrus sinensis; type=EST; length=674bp
CGGCCCACCAGGTCTGCCCGTACTCCAACGCCACCCGTGGCAACGTCGAT
GTGCGCCTGCACGTGACCGTTTGATCCAAACCGCGCCCACAAAAAAGCCC
GACTCATGGTCGGGCTTTTTTTGTCGTACCGGTGGCGCAAGAATTACTTC
TTGGCGCGACCTTTGTACGAACCACCTTCACGGGTGTCGATCTCGATCAG
GTCGTCGATTTCGATGAAATCGGCCACTTGCAGTTCGGTACCGTTAGCCA
GTTTGGCAGGCTTCATCACCTTGCCCGAAGTGTCGCCGCGAGCGGAACCT
TCGGTGTAGGCAACCTTACGCACGATAGTGGTCGGCAGCTCTACGGAAAC
CAGACGGTCTTCGAAGAAGATAGCTTCGCAGACGTCTTCCATGCCTTCTT
CCACGAATGGCAGAACGGCTTCGATGTCTTCAGCGTTCAGCTCGTACATG
GTGTAGTCGGTGGTGTCCATGAACGTGTAGGTGTCGCCGCTGATGAAGGA
CAGGGTCGCTTCTTTGCGGTCGAGGATCACGTCGTCCAGTTTGTCATCGG
CGCTGTAGACGATCTCGGTCTTGTAACCGGTCAGCAGGTTCTTCAGCTTG
GTCTTCATGATTGCGCTGTTACGACCAGACTTGGTGAATCAGCTTTCTGA
ACCACCAAGGTCGGCTAAGATTGC
back to top