EY728916

Overview
NameEY728916
Unique NameEY728916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_VEREI (Elongation factor P OS=Verminephrobacter eiseniae (strain EF01-2) GN=efp PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.118e-24
Identity = 61/155 (39.35%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + + GR +A ++ KLK+L+  + TEIV  ADDK+D+VILD+KE T S+ +               E+ A ++   L ++E+GM    E +F++ + +SVELPT++ R++ +TE + +GDTSGKVMKPAK+A G E+ V            DTR G
Sbjct:   27 YARGGRGAATVRMKLKSLIANFGTEIVLRADDKIDNVILDKKECTYSYFADPMYVCMDAEYNQY-EVEAGNMGDALNYLEDGM--ALEVVFYDGKAISVELPTSVEREITWTEPAVKGDTSGKVMKPAKIATGFEVPVPLFVAQGDRIEIDTRTG 178          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_RALME (Elongation factor P OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=efp PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 68/163 (41.72%), Postives = 98/163 (60.12%), Query Frame = -1
Query:  153 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDT-SGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRA 638
            + KSGRN+A++K K KNLLT    E V+ ADDK + V+L+R+E T S+ +              YE+  + +   L ++E+GM  V E +F+ D+ +SVE+PTT+VR++ YTE + +GDT SGKV+K AK+  G ELQV            DTR  G Y+ RA
Sbjct:   27 YNKSGRNAAVVKMKYKNLLTEAPGESVFKADDKFEVVVLERRECTYSYFA-DPMYVFMDTEYNQYEVEKDSMGDSLNYLEDGM--VVEVVFYNDKAISVEMPTTLVREIIYTEPAVKGDTSSGKVLKGAKINTGFELQVPLFCNIGDKIEIDTRT-GEYRSRA 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_DIAST (Elongation factor P OS=Diaphorobacter sp. (strain TPSY) GN=efp PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + + GR +A ++ KLK LL+   TE+V+ ADDK+D+VILD+KE T S+ +               E+ A ++   + ++E+GM    E +F++ + +SVELPT++ R++ +TE + +GDTSGKV+KPAK+A G E+ V            DTR G
Sbjct:   27 YARGGRGAATVRMKLKALLSNMGTEVVFKADDKIDNVILDKKECTYSYFADPMYVWMDAEYNQY-EVEASNMGDAISYLEDGM--AAEVVFYDGKAISVELPTSVEREITWTEPAVKGDTSGKVLKPAKIATGFEVAVPLFVDQGDKIEIDTRTG 178          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_ACISJ (Elongation factor P OS=Acidovorax sp. (strain JS42) GN=efp PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + + GR +A ++ KLK LL+   TE+V+ ADDK+D+VILD+KE T S+ +               E+ A ++   + ++E+GM    E +F++ + +SVELPT++ R++ +TE + +GDTSGKV+KPAK+A G E+ V            DTR G
Sbjct:   27 YARGGRGAATVRMKLKALLSNMGTEVVFKADDKIDNVILDKKECTYSYFADPMYVWMDAEYNQY-EVEASNMGDAISYLEDGM--AAEVVFYDGKAISVELPTSVEREITWTEPAVKGDTSGKVLKPAKIATGFEVAVPLFVDQGDKIEIDTRTG 178          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_RALEH (Elongation factor P OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=efp PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 67/163 (41.10%), Postives = 97/163 (59.51%), Query Frame = -1
Query:  153 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDT-SGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRA 638
            + KSGRN+A++K K KNLLT    E V+ ADDK + V+L+R+E T S+ +              YE+  + +   L ++E+GM    E +F+ D+ +SVE+PTT+VR++ YTE + +GDT SGKV+K AK+  G ELQV            DTR  G Y+ RA
Sbjct:   27 YNKSGRNAAVVKMKYKNLLTDAPGESVFKADDKFEVVVLERRECTYSYFA-DPMYVFMDADYNQYEVEKDSMGDSLNYLEDGMN--VEVVFYNDKAISVEMPTTLVREIVYTEPAVKGDTSSGKVLKGAKINTGFELQVPLFCNIGDKIEIDTRT-GEYRSRA 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_DELAS (Elongation factor P OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=efp PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -1
Query:  174 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREG 638
            + + GR +A ++ KLK+LL    TE+V+ ADDK+D+VILD+KE T S+ +               E+ A ++   + ++E+GME   E +F++ + +S ELPT++ R++ +TE + +GDTSGKV+KPAK+A G E+ V            DTR G
Sbjct:   27 YARGGRGAATVRMKLKSLLGNMGTEVVFKADDKIDNVILDKKECTYSYFADPMYVWMDADFNQY-EVEATNMGDAINYLEDGME--AEVVFYDGKAISCELPTSVEREITWTEPAVKGDTSGKVLKPAKIATGFEVPVPLFVSQGDKIEIDTRTG 178          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_CUPTR (Elongation factor P OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=efp PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 67/163 (41.10%), Postives = 97/163 (59.51%), Query Frame = -1
Query:  153 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDT-SGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRA 638
            + KSGRN+A++K K KNLLT    E V+ ADDK + V+L+R+E T S+ +              YE+  + +   L ++E+GM    E +F+ D+ +SVE+PTT+VR++ YTE + +GDT SGKV+K AK+  G ELQV            DTR  G Y+ RA
Sbjct:   27 YNKSGRNAAVVKMKYKNLLTDAPGESVFKADDKFEVVVLERRECTYSYFA-DPMYVFMDADYNQYEVEKDSMGDSLNYLEDGMN--VEVVFYNDKAISVEMPTTLVREIVYTEPAVKGDTSSGKVLKGAKINTGFELQVPLFCNIGDKIEIDTRT-GEYRSRA 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_RALEJ (Elongation factor P OS=Ralstonia eutropha (strain JMP134) GN=efp PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = -1
Query:  153 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDT-SGKVMKPAKLANGTELQVAXXXXXXXXXXXDTREGGSYKGRA 638
            + KSGRN+A++K K KNLLT    E V+ ADDK + V+L+R+E T S+ +              +E+  + +   L ++E+GM    E +F+ ++ +SVE+PTT+VR++ YTE + +GDT SGKV+K AK+  G ELQV            DTR  G Y+ RA
Sbjct:   27 YNKSGRNAAVVKMKYKNLLTEAPGESVFKADDKFEVVVLERRECTYSYFA-DPMYVFMDADYNQFEVEQDSMGDALNYLEDGM--AVEVVFYNEKAISVEMPTTLVREIVYTEPAVKGDTSSGKVLKGAKINTGFELQVPLFCNIGDKIEIDTRT-GEYRSRA 185          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_RALPJ (Elongation factor P OS=Ralstonia pickettii (strain 12J) GN=efp PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.589e-22
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  225 FTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDT-SGKVMKPAKLANGTELQV 638
            +++SGR+ A++K K KNLLTG   E V++ADDK+D VIL++KEA  S+  G             Y +    + + L ++++GM+   E  F+ +  +SVELPTT+VR++ YTE + +GDT SGKV+K A++ +  E  +
Sbjct:   29 YSRSGRSGAVVKMKYKNLLTGAGGESVFNADDKMDQVILEKKEAEYSYFDGTMYVFMDPVTYEQYNVEPAAMGSALNYLQDGMK--VEVTFYNENAISVELPTTVVREIVYTEPAVKGDTSSGKVLKAARINDNEEFTI 165          
BLAST of EY728916 vs. ExPASy Swiss-Prot
Match: EFP_JANMA (Elongation factor P OS=Janthinobacterium sp. (strain Marseille) GN=efp PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.571e-19
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = -1
Query:  234 SGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGXXXXXXXXXXXXXYELNAEDIEAVLPFVEEGMEDVCEAIFFEDRLVSVELPTTIVRKVAYTEGSARGDTSGKVMKPAKLANGTE 629
            S R     K K+KNLLT    E V+  DDK D V+LD+K  T S+ +               E+  E++   L ++++GME  CEA+F++ + +SVELP TI R+V Y+E + +G+TSG V+K AK+ N  E
Sbjct:   30 SSRTGFTYKWKMKNLLTNTPMENVFRGDDKFDVVVLDKKPVTYSYFADPLYVFMDEEYNQY-EIEEENLGDALHYLKDGME--CEAVFYDGKAISVELPITIARQVVYSEPAVKGNTSGNVLKEAKIENAVE 158          
The following BLAST results are available for this feature:
BLAST of EY728916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
EFP_VEREI2.118e-2439.35Elongation factor P OS=Verminephrobacter eiseniae ... [more]
EFP_RALME2.766e-2441.72Elongation factor P OS=Ralstonia metallidurans (st... [more]
EFP_DIAST2.766e-2438.06Elongation factor P OS=Diaphorobacter sp. (strain ... [more]
EFP_ACISJ2.766e-2438.06Elongation factor P OS=Acidovorax sp. (strain JS42... [more]
EFP_RALEH4.718e-2441.10Elongation factor P OS=Ralstonia eutropha (strain ... [more]
EFP_DELAS4.718e-2438.06Elongation factor P OS=Delftia acidovorans (strain... [more]
EFP_CUPTR4.718e-2441.10Elongation factor P OS=Cupriavidus taiwanensis (st... [more]
EFP_RALEJ1.051e-2339.88Elongation factor P OS=Ralstonia eutropha (strain ... [more]
EFP_RALPJ2.589e-2239.57Elongation factor P OS=Ralstonia pickettii (strain... [more]
EFP_JANMA1.571e-1939.39Elongation factor P OS=Janthinobacterium sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728916 ID=EY728916; Name=EY728916; organism=Citrus sinensis; type=EST; length=674bp
CGGCCCACCAGGTCTGCCCGTACTCCAACGCCACCCGTGGCAACGTCGAT
GTGCGCCTGCACGTGACCGTTTGATCCAAACCGCGCCCACAAAAAAGCCC
GACTCATGGTCGGGCTTTTTTTGTCGTACCGGTGGCGCAAGAATTACTTC
TTGGCGCGACCTTTGTACGAACCACCTTCACGGGTGTCGATCTCGATCAG
GTCGTCGATTTCGATGAAATCGGCCACTTGCAGTTCGGTACCGTTAGCCA
GTTTGGCAGGCTTCATCACCTTGCCCGAAGTGTCGCCGCGAGCGGAACCT
TCGGTGTAGGCAACCTTACGCACGATAGTGGTCGGCAGCTCTACGGAAAC
CAGACGGTCTTCGAAGAAGATAGCTTCGCAGACGTCTTCCATGCCTTCTT
CCACGAATGGCAGAACGGCTTCGATGTCTTCAGCGTTCAGCTCGTACATG
GTGTAGTCGGTGGTGTCCATGAACGTGTAGGTGTCGCCGCTGATGAAGGA
CAGGGTCGCTTCTTTGCGGTCGAGGATCACGTCGTCCAGTTTGTCATCGG
CGCTGTAGACGATCTCGGTCTTGTAACCGGTCAGCAGGTTCTTCAGCTTG
GTCTTCATGATTGCGCTGTTACGACCAGACTTGGTGAATCAGCTTTCTGA
ACCACCAAGGTCGGCTAAGATTGC
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