EY728915

Overview
NameEY728915
Unique NameEY728915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_SCHPO (Importin subunit alpha-1 OS=Schizosaccharomyces pombe GN=cut15 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.427e-42
Identity = 85/167 (50.90%), Postives = 119/167 (71.26%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTH--EQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            +  ++KEACWT+SNITAGN  QIQ VIEANII PL+ LL  A+F I+KEA WAISNATSGG    +QI++LV QG IKPLC+LL C D +I+ V L+G+ENIL+VGE ++      +N++   ++DA G++ I   Q   N+EIY+K+  ++E ++  +DE E + P
Sbjct:  345 RDGVRKEACWTISNITAGNSSQIQYVIEANIIPPLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKPLCNLLACQDNKIIQVALDGIENILRVGELDRANNPDKINLYAVYVEDAGGMDLIHECQNSSNSEIYQKAYNIIEKFFGEEDEIEELEP 511          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_SCHPO (Importin subunit alpha-2 OS=Schizosaccharomyces pombe GN=imp1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.691e-41
Identity = 82/165 (49.70%), Postives = 120/165 (72.73%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSG--GTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 512
            L  + K++I+KEACWT+SNITAGN +QIQA+IE+N+I PLV LL  A++  KKEA WAISNATSG  G  +QI++LV QG IKPLCD+L   D +I+ V L+ +ENILKVGE ++ +   ++N +   +++A G++ I  LQ+  N +IY K+  ++E Y+ D++
Sbjct:  340 LLSHQKENIRKEACWTISNITAGNTQQIQAIIESNLIPPLVHLLSYADYKTKKEACWAISNATSGGLGQPDQIRYLVSQGVIKPLCDMLNGSDNKIIQVALDAIENILKVGEMDRTMDLENINQYAVYVEEAGGMDMIHDLQSSGNNDIYLKAYSIIEKYFSDED 504          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA4_HUMAN (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.271e-34
Identity = 71/164 (43.29%), Postives = 110/164 (67.07%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAE-KNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 527
            K+ I KEA W +SNITAGN++Q+QAVI+AN++  ++ LL+  +F  +KEAAWAISN T  G  +Q+ +L+ Q  I P C+LL   D ++V V L+GL NILK+ E E + +GN        +I++  GLEKIE LQ H+N +IY+ + ++++ ++  D+ +  P
Sbjct:  339 KEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGN--------LIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDP 494          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.523e-33
Identity = 68/163 (41.72%), Postives = 106/163 (65.03%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 527
            K+ I KEA W +SNITAGN++Q+QAVI+AN++  ++ LL+  +F  +KEAAWAISN T  G  +Q+ +L+ Q  I P C+LL   D ++V V L+GL NILK+ E +             +I++  GLEKIE LQ H+N +IY+ + ++++ ++  D+ +  P
Sbjct:  339 KEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQ-------AETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDP 494          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32
Identity = 69/166 (41.57%), Postives = 110/166 (66.27%), Query Frame = 3
Query:   21 GLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKV-GEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDED 515
            GL  +YK+ I KEA W VSNITAGN++Q+Q V +A I+  ++ LL+  +F  +KEAAWAISN T  G   Q++ +V  G ++P C +L C D +I+ V L+G+ NILK+ GEA + +        T  I++  GL+KIE+LQ H+N +IY+ + ++++ ++  D++
Sbjct:  326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQV--------TSEIEECGGLDKIENLQNHENEDIYKLAFEIIDNFFSSDDE 483          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_HUMAN (Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32
Identity = 73/162 (45.06%), Postives = 110/162 (67.90%), Query Frame = 3
Query:   33 NYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 518
            N K +I+KEA WT+SNITAG ++QIQ V+   ++  LV++L  A+F  +KEA WA++N TSGGT EQI +LV  G I+PL +LL   D +I+ V L+ + NI    +A + LG T+    + MI++  GL+KIE+LQ H+N  +Y+ S+ L+E Y+  +E+E
Sbjct:  346 NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIF---QAAEKLGETE--KLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEE 502          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.748e-32
Identity = 77/171 (45.03%), Postives = 111/171 (64.91%), Query Frame = 3
Query:    9 PRTRGLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQ-GCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 518
            PR   L  + K +I KEA WTVSNITAGN++QIQAVI+A I   L T+LE  +F  +KEAAWA++N T+ GT EQI  L+ +   +KP  DLL   DPR + V   GL N+  + E    LG T+      M+++  GL+K+E+LQ H+N E+Y+K+  +++TY+ + +DE
Sbjct:  327 PRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKAQKEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAE---KLGGTE--NLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDE 492          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_MOUSE (Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.748e-32
Identity = 75/162 (46.30%), Postives = 110/162 (67.90%), Query Frame = 3
Query:   33 NYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 518
            N K +I+KEA WT+SNITAG ++QIQ V+   ++  LV +L  A+F  +KEAAWAI+N TSGGT EQI +LV  G I+PL +LL   D +I+ V L+ + NI    +A + LG T+    + MI++  GL+KIE+LQ H+N  +Y+ S+ L+E Y+  +E+E
Sbjct:  346 NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIF---QAAEKLGETE--KLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEE 502          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 67/163 (41.10%), Postives = 105/163 (64.42%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 527
            K+ I KEA W +SNITAGN++Q+QAVI+A +I  ++  L   +F  +KEAAWAISN T  G  +Q+++LV Q  I P C+LL   D ++V V L+GL+NIL        +   + +   ++I++  GLEKIE LQ H+N +IY+ + ++++ Y+  D+ +  P
Sbjct:  339 KEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNIL-------IMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDP 494          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA3_HUMAN (Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 67/163 (41.10%), Postives = 105/163 (64.42%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 527
            K+ I KEA W +SNITAGN++Q+QAVI+A +I  ++  L   +F  +KEAAWAISN T  G  +Q+++LV Q  I P C+LL   D ++V V L+GL+NIL        +   + +   ++I++  GLEKIE LQ H+N +IY+ + ++++ Y+  D+ +  P
Sbjct:  339 KEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNIL-------IMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDP 494          
The following BLAST results are available for this feature:
BLAST of EY728915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
IMA1_SCHPO1.427e-4250.90Importin subunit alpha-1 OS=Schizosaccharomyces po... [more]
IMA2_SCHPO2.691e-4149.70Importin subunit alpha-2 OS=Schizosaccharomyces po... [more]
IMA4_HUMAN9.271e-3443.29Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 ... [more]
IMA4_MOUSE3.523e-3341.72Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 ... [more]
IMA3_CAEEL1.339e-3241.57Importin subunit alpha-3 OS=Caenorhabditis elegans... [more]
IMA2_HUMAN1.339e-3245.06Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 ... [more]
IMA_DROME1.748e-3245.03Importin subunit alpha OS=Drosophila melanogaster ... [more]
IMA2_MOUSE1.748e-3246.30Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 ... [more]
IMA3_MOUSE9.594e-3141.10Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 ... [more]
IMA3_HUMAN9.594e-3141.10Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728915 ID=EY728915; Name=EY728915; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGCGGACGCGTGGGTTGTCGGGCAATTATAAAAAGAGCATT
AAAAAGGAAGCTTGTTGGACTGTCTCGAATATCACCGCTGGCAACAGGGA
GCAAATTCAGGCTGTGATTGAGGCTAACATAATTGGCCCCCTTGTTACTC
TACTTGAAAATGCTGAGTTTGACATAAAGAAAGAGGCCGCATGGGCTATC
TCAAACGCCACATCTGGTGGTACTCATGAGCAAATCAAATTCCTTGTGAT
TCAAGGGTGCATCAAGCCCTTGTGTGATCTTCTTGTATGTCCCGATCCAA
GAATTGTTACCGTCTGTTTGGAAGGGCTTGAGAACATATTGAAGGTGGGA
GAAGCCGAAAAGAATTTGGGCAACACAGATGTAAATGTCTTTACTCAAAT
GATTGATGATGCTGAGGGGTTAGAGAAAATTGAGAGTTTACAAACTCACG
ACAATGCTGAGATTTATGAGAAGTCTGTAAAGCTTCTGGAAACATATTGG
TTGGATGACGAGGATGAGACAATGCCACCAGGGGATGCTTCTCAACCTGG
TTTCGGATTTGGAGGCAATGGGAATCCTCCTGCTCCATCCGGTGGNCTTC
ATTTCAGCTAGAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCATGTGACA
AATTAATTCAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCTGTGGAGTAT
GATGGTGTTGGATCTTGTTAGGTGGTGGTTGTGTCATATTTGGTCCATTC
AGTCCATCTCTGTGTGTGTGTGAGTTTGGAGGATGATANCTCAATTCGAA
CATGCTGCTGCGATCAAAATACT
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