EY728915

Overview
NameEY728915
Unique NameEY728915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.809e-29
Identity = 70/166 (42.17%), Postives = 101/166 (60.84%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENIL----KVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETM 524
            K SI+KEA W +SNI AG   QIQ +I   ++ PLV LL+  +F  +KEA WA++N TSGGT EQ+  LV  G ++PL +LL   D + + V L+ + NI     K+GE EK            ++++  GLEKIE+LQTHDN  +Y  ++ L+E Y+  +E + M
Sbjct:  341 KPSIQKEAAWALSNIAAGPAPQIQQMITCGLLSPLVDLLKKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK---------LCLLVEELGGLEKIEALQTHDNRMVYHAALALIEKYFSGEEADEM 497          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENIL----KVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 512
            K SI+KEA W +SNI AG   QIQ +I   ++ PLV LL   +F  +KEA WA++N TSGGT EQ+  LV  G ++PL +LL   D + + V L+ + NI     K+GE EK            ++++  GLEKIE+LQTHDN  +Y  ++ L+E Y+  +E
Sbjct:  341 KPSIQKEAAWAISNIAAGPAPQIQQMITCGLLSPLVDLLNKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK---------LCLLVEELGGLEKIEALQTHDNHMVYHAALALIEKYFSGEE 493          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA8_HUMAN (Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.194e-26
Identity = 58/161 (36.02%), Postives = 101/161 (62.73%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDET 521
            K SI+KEA W +SN+ AG    IQ ++  +++ PLV LL+N EF ++KEA W ++N  +G T +Q+  LV  G ++PL +LL  PD +IV + L+ +  IL+  E      N        +I++  G+++IE+LQ H+N +I + ++ ++E ++ ++EDE+
Sbjct:  338 KPSIQKEAAWALSNVAAGPCHHIQQLLAYDVLPPLVALLKNGEFKVQKEAVWMVANFATGATMDQLIQLVHSGVLEPLVNLLTAPDVKIVLIILDVISCILQAAEKRSEKEN-----LCLLIEELGGIDRIEALQLHENRQIGQSALNIIEKHFGEEEDES 493          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1A_DICDI (Probable importin subunit alpha-A OS=Dictyostelium discoideum GN=DDB_G0273149 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.171e-26
Identity = 64/162 (39.51%), Postives = 98/162 (60.49%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIE-ANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDET 521
            KKSI+KE+CW +SNITAG   QI  V+     +  L++LL ++E DIK+EA WA+SN+T+  + + I+ LV    +K   DLL   D  I+ + LEGL NI+K GE  K    T VN +  +I + +G   I  LQ H + ++Y+K+ +L+E +   D  ++
Sbjct:  365 KKSIRKESCWALSNITAGEPSQIDVVVSNPKTVTTLISLLSHSEHDIKREACWALSNSTNNSSTKSIQTLVRHNILKHFIDLLNSQDLVILKIVLEGLINIIKEGEKTKT--KTGVNPYVNLISEMQGESIIYDLQEHQSKDVYKKAFELIEFFESSDYSDS 524          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_CAEEL (Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 48/156 (30.77%), Postives = 91/156 (58.33%), Query Frame = 3
Query:   45 SIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 512
            SI KE CW VSNI AG ++QIQAV++AN++  L+ +L++ +   + EA+WA+SN   GGT+ Q+  ++    +  LC  L+  +  ++   LE L  ++      +N     V++    +++  GL+ +E LQ   + +IY ++ +++  ++ DD+
Sbjct:  360 SIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQTNTDMLNNTLETLYTLML---TVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAYRIITQFFTDDD 512          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_CAEEL (Importin subunit alpha-1 OS=Caenorhabditis elegans GN=ima-1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 34/155 (21.94%), Postives = 82/155 (52.90%), Query Frame = 3
Query:   48 IKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 512
            + +E C+ +SNI     + I  +I + ++  +  ++E +E+  ++EAA+ I +  +    + ++++V  G +    DLL C D  +V+  L+ +  +L+ GE      N+  N     +++    EK+E L    + +I+ ++  +++ +++DD+
Sbjct:  337 MSQEVCFIISNICVEGEQTIDKLISSGVLREVARVMEASEYRSRREAAFVICHCCASANQKHLEYVVELGMLSAFTDLLTCMDVSLVSYILDAIYLLLQFGEMRLLPDNS--NPVAIKLEEIGCREKLEFLCESQSVDIHARAYTIIDRFYVDDD 489          
The following BLAST results are available for this feature:
BLAST of EY728915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
IMA2_XENLA1.809e-2942.17Importin subunit alpha-2 OS=Xenopus laevis GN=kpna... [more]
IMA1_XENLA5.264e-2942.59Importin subunit alpha-1 OS=Xenopus laevis GN=kpna... [more]
IMA8_HUMAN3.194e-2636.02Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 ... [more]
IMA1A_DICDI4.171e-2639.51Probable importin subunit alpha-A OS=Dictyostelium... [more]
IMA2_CAEEL3.781e-1930.77Importin subunit alpha-2 OS=Caenorhabditis elegans... [more]
IMA1_CAEEL6.465e-1121.94Importin subunit alpha-1 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728915 ID=EY728915; Name=EY728915; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGCGGACGCGTGGGTTGTCGGGCAATTATAAAAAGAGCATT
AAAAAGGAAGCTTGTTGGACTGTCTCGAATATCACCGCTGGCAACAGGGA
GCAAATTCAGGCTGTGATTGAGGCTAACATAATTGGCCCCCTTGTTACTC
TACTTGAAAATGCTGAGTTTGACATAAAGAAAGAGGCCGCATGGGCTATC
TCAAACGCCACATCTGGTGGTACTCATGAGCAAATCAAATTCCTTGTGAT
TCAAGGGTGCATCAAGCCCTTGTGTGATCTTCTTGTATGTCCCGATCCAA
GAATTGTTACCGTCTGTTTGGAAGGGCTTGAGAACATATTGAAGGTGGGA
GAAGCCGAAAAGAATTTGGGCAACACAGATGTAAATGTCTTTACTCAAAT
GATTGATGATGCTGAGGGGTTAGAGAAAATTGAGAGTTTACAAACTCACG
ACAATGCTGAGATTTATGAGAAGTCTGTAAAGCTTCTGGAAACATATTGG
TTGGATGACGAGGATGAGACAATGCCACCAGGGGATGCTTCTCAACCTGG
TTTCGGATTTGGAGGCAATGGGAATCCTCCTGCTCCATCCGGTGGNCTTC
ATTTCAGCTAGAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCATGTGACA
AATTAATTCAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCTGTGGAGTAT
GATGGTGTTGGATCTTGTTAGGTGGTGGTTGTGTCATATTTGGTCCATTC
AGTCCATCTCTGTGTGTGTGTGAGTTTGGAGGATGATANCTCAATTCGAA
CATGCTGCTGCGATCAAAATACT
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