EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728912_ssr299 microsatellite EY728912_ssr299:299..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:77..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37
Identity = 95/279 (34.05%), Postives = 135/279 (48.39%), Query Frame = 2
Query:   89 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP------EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFD-------------------------IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPVTWICSTTER 829
            +YYE LGV  + ++D+LKKAYRK A+K HPDK   P       KFK++++AYEVLSDPEKR++YD YG + +KE       A D F                                                  ED+ H +  SLE+LYNG   K+S+SR+ V                      GS      + +GP MIQQ+Q  C+ C GTGE I ++D+  +CKG++VIQ KK+++  VEKG  +G++I    +  E P + P   I +  E+
Sbjct:    6 EYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMKESGFHASSAEDLFSHFFGAGGGGGGFSFGGGGGDDFGGFSFGNMGGMGGMGGMGGGHKKRRKGEDIEHEMNRSLEELYNGKLVKISISRDEVCKTCKGSGSNKPGVTTTCPTCNGSRYVFQKKQVGPGMIQQVQTACHTCHGTGEKIKEEDKCKECKGKRVIQGKKIVQFQVEKGTRDGERIMLQGQGSEYPGVPPGDVIITIREK 284          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: SCJ1_YEAST (DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae GN=SCJ1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIH-PLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPE 790
            YY IL + K+A++ ++K AYR+ + K HPDK    E    KF E+ +AY+VLSDPEK++IYDQ+G DA+K                HDPFDI                         +I    K+SL+  Y+G+S + +L+ N                      QG G+ + +  +G  M QQ+Q  C  C GTG+ I  K+    C G+KV ++ K   V V  G       T   E ++ P+
Sbjct:   24 YYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIYDQFGADAVKNGGGGGGPGGPGAGGFHDPFDIFERMFQGGHGGPGGGFGQRQRQRGPMIKVQEKLSLKQFYSGSSIEFTLNLNDECDACHGSGSADGKLAQCPDCQGRGVIIQVLRMG-IMTQQIQQMCGRCGGTGQII--KNECKTCHGKKVTKKNKFFHVDVPPGAPRNYMDTRVGEAEKGPD 265          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21
Identity = 69/241 (28.63%), Postives = 105/241 (43.57%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDAL-KEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYEILGVS++A Q ++KKAYR+ A K HPD   D     EKFKE+++AYE+LSDP+KR  YDQYG   + +E       A   F                          D+ + +K+  ED   GT+KK+++ R                            +V      P         C+ C G G  I+D    P C+G   +++++ + V +  G   G ++  P E +   + +P
Sbjct:    7 YYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFNFEDFAQRGFGGFDDIFDMFFGGGMGRRRRGPRPGADLQYRMKIPFEDAAFGTTKKITIPRTETCDTCNGTGAKPGTSPKTCPQCNGSGQVRYTQRTPFGQFAQTRTCDRCGGRGTIIDDP--CPTCQGSGKVRKQRKITVKIPPGVDTGTRLRMPNEGEAGDKGAP 245          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_SACD2 (Chaperone protein dnaJ OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20
Identity = 76/242 (31.40%), Postives = 106/242 (43.80%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYE+LGVSK+ S  +LKKAYRK A+K HPD+  D     +KFKE ++AYEVLSD +KR  YDQYG   +           A +  DI                        D+ + L +SLED   GT+ K+ +   V                      G   +V ++  G   +QQ    C  C+G G+ I D  +  +C G   ++E K L V V  G   G +I    E +   +  P
Sbjct:    6 YYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDPNSEDKFKEASEAYEVLSDAQKRAAYDQYGHAGVDGNAGMGGGAGAGNFSDIFGDVFGDIFGGGGGRRRGGPSRGSDLRYTLDLSLEDAVKGTTVKIRVPTLVSCKPCGGSGAKPGTSPQTCTTCGGHGQVRMQQ-GFFSVQQ---TCPNCRGQGKMITDPCK--ECHGHGRVEETKTLSVKVPPGVDTGDRIRLAGEGEAGADGGP 241          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20
Identity = 82/254 (32.28%), Postives = 113/254 (44.49%), Query Frame = 2
Query:   77 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-----HDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAP 787
            ++   YYE+LGVSKNA+ D+LKKAYRK AI+ HPDK  GD    E FKE+A+AY+VLSDPEKR  YDQ+G   L                D F                               D+   +K+SL D+  G  KK+ + + V+                      G+G+  +VS   LG     Q Q  C  C G GE I       +CKGE V   ++V+   +  G A G +++   + + AP
Sbjct:    2 AEKRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPEKRSRYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGSSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLG---AMQTQSTCPTCHGEGEIITKP--CSKCKGEGVEIGEEVISFHIPAGVAEGMQMSVNGKGNAAP 250          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20
Identity = 81/254 (31.89%), Postives = 113/254 (44.49%), Query Frame = 2
Query:   77 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-----HDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAP 787
            ++   YYE+LGVSKNA+ D+LKKAYRK AI+ HPDK  GD    E FKE+A+AY+VLSDP+KR  YDQ+G   L                D F                               D+   +K+SL D+  G  KK+ + + V+                      G+G+  +VS   LG     Q Q  C  C G GE I       +CKGE V   ++V+   +  G A G +++   + + AP
Sbjct:    2 AEKRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGGSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLG---AMQTQSTCPTCHGEGEIITKP--CSKCKGEGVEIGEEVISFHIPAGVAEGMQMSVNGKGNAAP 250          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20
Identity = 68/228 (29.82%), Postives = 100/228 (43.86%), Query Frame = 2
Query:   77 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI----------------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQE 703
            S    YYEIL VS++A+Q D+KKA+RK A+K HPD+  D    EKFKE+ +AYEVLSD EKR++YD YG + L           +P+D+                                        +++H +K++  +  NG  K +  +R V                      G G  V  R     M  Q +  C  CKG G+TI  K++  +CK  +++ E
Sbjct:    2 SSKRDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGL-NASGFHQGGFNPYDVFNSVFSGFDFEGGFGDVFSQFFGGGGSGFHNQEYIEEVDVNLVHEIKINFLEAANGCIKNVKYTRQVTCPDCNGSGSADGDVITCSDCNGEGFLVEQRRTLLGMF-QTKKTCPSCKGEGQTI--KNKCKKCKSRRMVDE 225          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 2.545e-20
Identity = 79/248 (31.85%), Postives = 110/248 (44.35%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK-VSIRH------LGPSMIQQMQ-HPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            +Y+ILGV+KNA+ + +KKAYRK A + HPD+  D E    KF++L+ AYEVLSD EKR +YD++GE+ + +        HDPF                          DV   L V+LE++YNG   ++   + V                     Q SG +  + RH      +G    Q  Q   C+EC                   K++QE KVLEV VE G  NG +  F  E +   E  P
Sbjct:   25 FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFS--SFFGDFFGGGGGHGGEEGTPKGADVTIDLFVTLEEVYNGHFVEIKRKKAV-------------------YKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPNV----------------KLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDP 235          

HSP 2 Score: 22.3274 bits (46), Expect = 2.545e-20
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  823 RKTPEIKRKGDDLW 864
            +K P  +RKGDDL+
Sbjct:  245 QKHPRFERKGDDLY 258          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 77/272 (28.31%), Postives = 116/272 (42.65%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI------------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPV--TWICSTTERHP 835
            YYE+LGVSK AS D++K AYRK AIK HPDK  GD    EKFKE  +AYEVL DP+KR+ YDQ+G+  +         A    D                                     D+ + L+VSLED   G   K+ + R                       +GS   V     G   +++ Q        C  CKG G+ I++  +   CKGE + ++++ + + +  G  +G ++    E +  P   P    ++ +  ++HP
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPR----------LETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQGFFSVTTTCPRCKGKGKVISNPCK--TCKGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGESGPNGGPSGDLYVVTHIKKHP 265          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 77/272 (28.31%), Postives = 116/272 (42.65%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI------------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPV--TWICSTTERHP 835
            YYE+LGVSK AS D++K AYRK AIK HPDK  GD    EKFKE  +AYEVL DP+KR+ YDQ+G+  +         A    D                                     D+ + L+VSLED   G   K+ + R                       +GS   V     G   +++ Q        C  CKG G+ I++  +   CKGE + ++++ + + +  G  +G ++    E +  P   P    ++ +  ++HP
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPR----------LETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQGFFSVTTTCPRCKGKGKVISNPCK--TCKGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGESGPNGGPSGDLYVVTHIKKHP 265          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJA1_DICDI3.474e-3734.05DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
SCJ1_YEAST3.372e-2431.43DnaJ-related protein SCJ1 OS=Saccharomyces cerevis... [more]
DNAJ_HALOH7.774e-2128.63Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_SACD21.015e-2031.40Chaperone protein dnaJ OS=Saccharophagus degradans... [more]
DNAJ_PORG31.015e-2032.28Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_PORGI2.262e-2031.89Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_MYCGA2.262e-2029.82Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
DNJ20_CAEEL2.545e-2031.85DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNAJ_LEPBP2.954e-2028.31Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA2.954e-2028.31Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
back to top