EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCM (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCJ (Chaperone protein dnaJ OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCH (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain HI2424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCC (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURCA (Chaperone protein dnaJ OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BURA4 (Chaperone protein dnaJ OS=Burkholderia ambifaria (strain MC40-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD +KR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDGQKRAAYDQYG 70          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBPA (Chaperone protein dnaJ OS=Vibrio parahaemolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 71/250 (28.40%), Postives = 111/250 (44.40%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH-----DPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPEL 793
            +YE+LGVS++AS+ D+KKAY++ A+K HPD+  GD    +KFKE+ +AYEVL+D +K+  YDQYG  A ++              D  DI                         D+ + ++++LE+   G +K++ +   V                     +GS  +      G   +Q       +Q  C  C G G+ I  KD   +C G+   Q+ K L V +  G   G +I    E  EA E+
Sbjct:    6 FYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEVLTDSQKKAAYDQYGHAAFEQGGGGFGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGGHRAQRGADLRYNMELTLEEAVRGVTKEIEVPTLV----------HCDSCDGSGAKKGSSAETCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKII--KDPCNECHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGE-GEAGEM 242          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEPA (Chaperone protein dnaJ OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 64/239 (26.78%), Postives = 102/239 (42.68%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDAL--KEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYE+LGV ++ S+ ++KKAY++ A+K HPD+  GD E    FKE+ +AYE+L+D +K+  YDQ+G   +           + D  D+                        D+ + L++SLE+   G +K+L +                         +GS         G   +Q       +Q  C  C G G+ I  KD   +C GE  +++ K L V +  G   G +I    E
Sbjct:    6 YYEVLGVGRDTSEREIKKAYKRLAMKFHPDRNPGDKEAEANFKEVKEAYEILTDSDKKAAYDQFGHAGVDPNRGGGGYGGSADFGDVFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVRGLTKELRI----------PTLAACDSCDGSGAKKGSSPTTCGTCHGQGQVQMRQGFFAVQQACPTCHGRGKII--KDPCNKCHGEGRVEKSKTLSVKIPAGVDTGDRIRLSGE 232          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOPR (Chaperone protein dnaJ OS=Photobacterium profundum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 65/242 (26.86%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKE----XXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            +YE+LGV ++A + D+KKAY++ A+K HPD+  +    EKFKE+  AYE+L+DP+K+  YDQYG  A ++             D  DI                          D+ + ++++LE+   G SK++ +   V                     +GS         G   +Q       +Q  C  C G G+ I  KD    C G+  +++ K L V +  G   G +I    E
Sbjct:    6 FYEVLGVGRDAGERDIKKAYKRLAMKFHPDRNQEADATEKFKEVKTAYEILTDPQKKAAYDQYGHAAFEQGSGGGGYGGGGGADFGDIFGDVFGDIFGGAGGGRRQQQRAQRGSDLRYNMELTLEEAVRGCSKEIRVPTLV----------GCDSCDGSGAKRGSSATTCGTCHGQGQVQMRQGFFAVQQACPHCHGRGKII--KDPCNSCHGQGRVEKTKTLSVKIPAGVDTGDRIRLSGE 235          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BURVG1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_BURCM1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]
DNAJ_BURCJ1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia cepacia (st... [more]
DNAJ_BURCH1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURCC1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURCA1.678e-1561.54Chaperone protein dnaJ OS=Burkholderia cenocepacia... [more]
DNAJ_BURA41.678e-1561.54Chaperone protein dnaJ OS=Burkholderia ambifaria (... [more]
DNAJ_VIBPA2.191e-1528.40Chaperone protein dnaJ OS=Vibrio parahaemolyticus ... [more]
DNAJ_SHEPA2.191e-1526.78Chaperone protein dnaJ OS=Shewanella pealeana (str... [more]
DNAJ_PHOPR2.191e-1526.86Chaperone protein dnaJ OS=Photobacterium profundum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
back to top