EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESR (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 68/246 (27.64%), Postives = 103/246 (41.87%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL------GPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYE+LGV ++AS+ ++KKAY++ A+K HPD+  GD      FKE+ +AYE+L+D  K+  YDQ+G    D  +        A D  DI                        D+ + L++SLE+   G +K+L +                          GSG K            G   +Q       +Q  C  C G G+ I  KD   +C G+  +++ K L V +  G   G +I    E
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------------PTLASCDVCDGSGAKKGTSATTCGTCHGQGQVQMRQGFFTVQQACPTCHGRGKII--KDPCTKCHGDGRVEKTKTLSVKIPAGVDTGDRIRLAGE 233          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESM (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 68/246 (27.64%), Postives = 103/246 (41.87%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL------GPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYE+LGV ++AS+ ++KKAY++ A+K HPD+  GD      FKE+ +AYE+L+D  K+  YDQ+G    D  +        A D  DI                        D+ + L++SLE+   G +K+L +                          GSG K            G   +Q       +Q  C  C G G+ I  KD   +C G+  +++ K L V +  G   G +I    E
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------------PTLASCDVCDGSGAKKGTSATTCGTCHGQGQVQMRQGFFTVQQACPTCHGRGKII--KDPCTKCHGDGRVEKTKTLSVKIPAGVDTGDRIRLAGE 233          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILW (Chaperone protein dnaJ OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 64/249 (25.70%), Postives = 105/249 (42.17%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            +YE LGV+K A + +LK A+RK A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +                  D F+                         D+ + ++++LE+ ++G + ++ +  ++                      QGSG     R         ++  C  C G G+ I   D  P+C G+  + E++ L V +  G  +G +I    E +      P
Sbjct:    6 FYETLGVAKTADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGGFAGGGFSDIFE-DIFGEMMGGGRARQRSSGGRERGADLRYNMEITLEEAFSGKTAQIRVPTSITCDVCSGSGAKPGTQPKNCGTCQGSG-----RVRAAQGFFSIERTCPTCHGRGQII--PDPCPKCHGQGRVTEERSLSVNIPAGIEDGTRIRLQGEGEAGARGGP 246          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIEC (Chaperone protein dnaJ OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 63/248 (25.40%), Postives = 106/248 (42.74%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            +YE LGV+K+A + +LK A+RK A+K HPDK  D +    KFKE+ +AYE+L DP+KR  YD+YG  A +                 D F+                         D+ + ++++LE+ ++G + ++ +  ++                      QG+G     R         ++  C  C G G+ I   D  P+C G+  + E++ L V +  G  +G +I    E +      P
Sbjct:    6 FYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDDKEAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFE-DIFGEMMGGGRGRQRSAGGRERGADLRYNMEITLEEAFSGKTAQIRVPTSITCDVCSGSGAKPGTQPKNCGTCQGTG-----RVRAAQGFFSIERTCPTCHGRGQII--PDPCPKCHGQGRVTEERSLSVNIPAGIEDGTRIRLQGEGEAGTRGGP 245          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYIN (Chaperone protein dnaJ OS=Psychromonas ingrahamii (strain 37) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 62/248 (25.00%), Postives = 105/248 (42.34%), Query Frame = 2
Query:   95 YEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH---DPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YE+LG+S++A++ ++KKAY++ A+K HPD+  G+ E   KFKE+ +AYE+L+D +K+  YDQYG D + +            D F                          D+ + ++++LE+   G SK++ +   V                     +G+  K      G   +Q  Q        C  C+G G+ I+D     +C G    +  K + V +  G   G +I    E +      P
Sbjct:    7 YEVLGISRDATEKEVKKAYKRLAMKYHPDRTSGNDELEVKFKEVKEAYEILNDSQKKAAYDQYGHDGVNQQGRGGFDNSDFGDQFGDIFGDIFGGGRRGGGGGGQRPQQGSDLRYNMELTLEEAVRGISKEIQIPTQV----------HCEQCNGSGAKKGTEAKTCGTCYGQGQVQMRQGFFAVNQACPTCRGQGKIISDP--CHKCHGHGRYERSKNMSVKIPAGVDTGDRIRLSGEGEAGEHGGP 242          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 71/261 (27.20%), Postives = 102/261 (39.08%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA----HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVI---------------HPLKVSL----EDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAP 787
            YYEILGV ++A +D++KKAYRK A+K HPDK  D     + FKE+ +AYEVLS+ +KR  YDQ+G   +         A        D                        ED                   LK+ L    E++  G  K L + + V                      G+G    +R    +M  Q  +   C  C G G  +  KDR P C GE + Q +  ++V V  G  +   +T   + +  P
Sbjct:    5 YYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGAGAYGAGGADFSDIFSAFNDMFGGGGGGRGRGGFEDAFGGGQRRSRASAGIQGTDLKIRLKLSLEEIAKGVEKTLKIKKQVPCKECNGSGSKTGATETCPTCHGTG---EVRQASKTMFGQFVNIAACPTCGGEGRIV--KDRCPACYGEGIKQGEVTVKVTVPAGVQDNNYLTLRGQGNSGP 260          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PECCP (Chaperone protein dnaJ OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 67/244 (27.46%), Postives = 107/244 (43.85%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKE---XXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYE LGV+K+A + ++KKAY++ A+K HPD+  GD E   KFKE+ +AYE+L D +KR  YDQYG  A ++               D                         D+ + ++++LE+   G +K++ + +                         G+G +V +R  G   +QQ    C  C G G+ I  KD   +C G   +++ K L V +  G   G +I    E +     +P
Sbjct:    6 YYESLGVAKSADEREIKKAYKRLAMKYHPDRNPGDSEAEAKFKEIKEAYEILIDSQKRAAYDQYGHAAFEQGGMGGSGGGFGGGGADFGDIFGDVFGDIFGGGRRQRASRGSDLRYNMELTLEEAVRGVTKEIRIPALEECDVCHGNGAKPGSSPITCPTCHGNG-QVQMRQ-GFFTVQQ---ACPHCHGRGKII--KDPCVKCHGHGRVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAP 242          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYG 274
            YYE+LG+SK+AS D++KKAYRK + + HPD   + G  EKFKE+++AYEVLSD +KR  YDQYG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYG 69          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_HELPY (Chaperone protein dnaJ OS=Helicobacter pylori GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 63/235 (26.81%), Postives = 104/235 (44.26%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDE 781
            YYEIL V K+++Q+ +KK+YRK A+K HPD+  GD    EKFK + +AY VLSD +KR +YD+YG+  L +         D F D+                        D +  L++S ++   G  K + +    +                     G G +V +R    S  Q     C  C+G G+ +  K     CKG+  I + + ++ I+ +G  +  ++    + +E
Sbjct:    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQGDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTLELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQG-QVFMRQGFMSFAQ----TCGACQGKGKIV--KTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE 232          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.861e-15
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 274
            YYEILGVSKNA+++++KKAYRK + K HPD   +P   EKFKE+ +AYEVLSD +KR  YDQ+G
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFG 69          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SHESR2.861e-1527.64Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_SHESM2.861e-1527.64Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_RHILW2.861e-1525.70Chaperone protein dnaJ OS=Rhizobium leguminosarum ... [more]
DNAJ_RHIEC2.861e-1525.40Chaperone protein dnaJ OS=Rhizobium etli (strain C... [more]
DNAJ_PSYIN2.861e-1525.00Chaperone protein dnaJ OS=Psychromonas ingrahamii ... [more]
DNAJ_PROVI2.861e-1527.20Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]
DNAJ_PECCP2.861e-1527.46Chaperone protein dnaJ OS=Pectobacterium carotovor... [more]
DNAJ_LISW62.861e-1560.94Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_HELPY2.861e-1526.81Chaperone protein dnaJ OS=Helicobacter pylori GN=d... [more]
DNAJ_GEOSW2.861e-1562.50Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
back to top