EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728912_ssr299 microsatellite EY728912_ssr299:299..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:77..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 289
            YY ILG+ K AS +D+KKAYRK A++ HPDK   P   E+FKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19
Identity = 71/235 (30.21%), Postives = 103/235 (43.83%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YY+ILGVSK ASQ DLKKAY K A + HPD   D +   KFKE+ +AY+VL D +KR  YD++G D  +               HD  DI                        D+ + L ++LE+ ++G  K +S S  V                      G         +G + IQQ    ++  C++CKG G+ I  K+   +C G     +++ L V +  G  NG +I
Sbjct:    5 YYKILGVSKTASQADLKKAYLKLAKQYHPDTTDDKDAEKKFKEINRAYDVLKDEQKRAAYDRFGHDTFQNQQSRGGGGSHAGFHHDINDIFGDFFSDFMGGGRRKPTSSKARGSDLKYDLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACGG--------VGATRIQQGFFTIEQACHKCKGNGQII--KNPCKKCHGMGRCHKQRNLSVNIPAGVENGTRI 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19
Identity = 74/251 (29.48%), Postives = 114/251 (45.42%), Query Frame = 2
Query:   95 YEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH--------LGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPEL 793
            Y ILGV + A+QD++KKAYRK ++K HPD+  +      EKFKE+ +AYE+LSD +KR  YD++G DA  +       +   F DI                        D+ + +++SLE+  +G  K++ ++  V                      GSGM    +          G   +QQ    +  PC  C G GE I  ++   +C+G   +++ +VL V +  G  NG +I    E  EA EL
Sbjct:    7 YAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFDAANQGAAGGGFSGGNFSDIFGDVFGDIFGNVRQTNGARQTRGHDLAYKIELSLEEAIHGVEKQIRIATQV----------------RCGECHGSGMNAKSKKKTCPTCNGAGQVRMQQGFFSIAQPCPTCHGRGEII--ENPCNKCQGTGRVKDTRVLTVNIPAGVDNGDRIRLSGE-GEAGEL 238          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19
Identity = 77/266 (28.95%), Postives = 109/266 (40.98%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQY-----GEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDV-----------------IH------PLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAP 787
            YYEILGVS++A +D++KKAYRK A+K HPDK  D     EKFKE  +AYEVLS+ +KR  YDQ+     G  A               DI                       ED+                 IH       LK++LE++  G  K L + + V+                     GSG    +R    +M  Q  +   C  C G G+ +  KDR   C GE + Q +  +++ V  G  +G  +T   + +  P
Sbjct:    5 YYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGGFGGGGYADINDIFEMFTGGGRARGGGSPFSGFEDIFGGGFSGGGGRRARSTGIHGTDLKIRLKLTLEEIAKGVEKTLKIKKQVVCSECNGTGSKSGKTETCQTCHGSG---EVRQASKTMFGQFVNIVACPTCGGEGQVV--KDRCTSCYGEGIKQGEVTVKINVPAGVQDGNYLTLQGQGNAGP 265          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19
Identity = 71/240 (29.58%), Postives = 103/240 (42.92%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     +KFKE ++AYEVLSD EKR +YD+ G +A +             DI                          D+ + +++SLE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNAFEGGGGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQQRQRRGSDLRYVMELSLEEAVRGVKKTITFT----------------APAPCEVCDGKGSKNPNDVETCRTCHGTGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCQSCHGSGVADRQQTLEVTIPAGVDNGDRV 227          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRW (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.572e-19
Identity = 78/252 (30.95%), Postives = 117/252 (46.43%), Query Frame = 2
Query:   74 KSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE------XXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL--------GPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            KSD   YY++LG+SKNA+ +++KKAYRK A+K HPDK  GD    EKFKEL++AY+VL D +KR  YD+YG  A  +             + D  DI                          D+   ++++LED +NGT   ++   +V                      GSG + S++ +        G    QQ    ++  C+ C G GE I  K++  +C G   ++++  L V V KG  +G KI
Sbjct:    3 KSD---YYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSAFSDGSGRGGFDFNSGFSTDFSDIFNDLFGGGFRGGRSSSKRQDGGTVGSDLRLDIEITLEDSFNGTKVPINYVTHV----------------KCSSCSGSGSEGSVKSVQCNTCHGAGNIRTQQGFFTIERTCHVCNGEGEII--KNKCKKCSGSGRVRDEVNLLVTVPKGIESGDKI 233          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19
Identity = 43/69 (62.32%), Postives = 59/69 (85.51%), Query Frame = 2
Query:   86 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK 289
            TK Y++LGVS +A++ +LKK YRKAA+K HPDK  GD EKFKE+++A+E+L+DP+KREIYDQYG +A +
Sbjct:    5 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 73          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19
Identity = 79/248 (31.85%), Postives = 107/248 (43.15%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK-VSIRH------LGPSMIQQMQ-HPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            +Y+ILGVSKNA+ + +KKAYRK A + HPD+  D E    KF++L+ AYEVLSD EKR +YD++GE+ + +        HDPF                          DV   L V+LE+ YNG   ++   + V                     Q SG +  + RH      +G    Q  Q   C+EC                   K++QE KVLEV VE G   G    F  E +   E  P
Sbjct:   25 FYKILGVSKNANANQIKKAYRKQAKELHPDRNPDDEMANEKFQDLSAAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFS--SFFGDFFGGGGGNGGDEGTPKGADVTIDLFVTLEEAYNGHFVEIKRKKAV-------------------YKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPNV----------------KLVQENKVLEVEVEVGADEGHTQIFHGEGEPHIEGDP 235          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_THISH (Chaperone protein dnaJ OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19
Identity = 71/235 (30.21%), Postives = 103/235 (43.83%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYEILGV+KNAS+ +LKKA+R+ A+K+HPD+  GD    EKFKE  +AYE+L+DP+KR  YDQ+G   +             F                          D+ + L+++LE+   GT  K+ +   V                      G         +G   +QQ    +Q  C  C GTG+ I    +   C G+  ++E K L V V  G  +G +I    E
Sbjct:    6 YYEILGVAKNASEAELKKAFRRLAMKHHPDRNPGDKESEEKFKEAKEAYEILTDPQKRAAYDQFGHAGVDPSAGGGARGGASFSDIFEDIFGDIFGGGRGGGSRVYRGSDLQYNLELTLEEAVFGTEVKIRVPSLVECGECHGSGAEKGTTPETCGTCGG--------VGQVRMQQGFFSVQQTCPRCHGTGKMITHPCK--ACHGQGRVEEHKTLSVKVPAGVDSGDRIRLSGE 230          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOFL (Chaperone protein dnaJ OS=Blochmannia floridanus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19
Identity = 78/273 (28.57%), Postives = 120/273 (43.96%), Query Frame = 2
Query:   74 KSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH-DPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVS------IRHLGPSMIQ------QMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPV--TWICSTTERHP 835
            KSD   YYEILGVSKNA + ++KK+Y++ A+K HPD+  GD     KFKE+ +AYEVLS+PEKR  YDQYG    ++       ++    D                         D+ + +++SLE+   G  +++ +   V                     +GSG K S      +   G   IQ       +Q  C  C G G+ I  K+   +C+G   I+  K L V +  G + G +I    E +     +P    ++    ++HP
Sbjct:    3 KSD---YYEILGVSKNADEREIKKSYKRLAMKFHPDRNPGDVSAESKFKEIKEAYEVLSNPEKRSAYDQYGHAIFEQNSGGMGGSNTGGSDFSDIFGDVFGDIFGGSRRSRSRRGSDLRYDIELSLEEAVKGVVREICVPTLV----------------TCLQCRGSGAKSSASIVSCVTCHGHGQIQMRQGFFSVQQSCPSCNGHGKII--KEICNKCRGSGRIERTKTLSVKIPAGVSTGDRIRLSGEGESGKNGAPAGDLYVQVQIKKHP 254          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB4_BOVIN4.266e-1965.22DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNAJ_RICAH4.266e-1930.21Chaperone protein dnaJ OS=Rickettsia akari (strain... [more]
DNAJ_DICNV4.266e-1929.48Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_CHLP84.266e-1928.95Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ACIAD4.266e-1929.58Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_EHRRW5.572e-1930.95Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]
SIS1_YEAST7.277e-1962.32Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJ20_CAEBR7.277e-1931.85DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_THISH9.504e-1930.21Chaperone protein dnaJ OS=Thioalkalivibrio sp. (st... [more]
DNAJ_BLOFL9.504e-1928.57Chaperone protein dnaJ OS=Blochmannia floridanus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
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