EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728912_ssr299 microsatellite EY728912_ssr299:299..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:77..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 73/256 (28.52%), Postives = 105/256 (41.02%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF---DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPV--TWICSTTERHP 835
            YYE+LGV +NASQD++KKA+R+ A + HPD    P+   KFKE+ +AYEVLSDPEKR +YD++G               DPF   D                         D+ + L +S E+   G  K +   R  +                       G    IR   P         C+ C+G G  I    R  +C+GE  +++ + + V V  G  N  +I    E D  P   P    ++    + HP
Sbjct:    7 YYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFG-----HAGPTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQRGADLRYTLSISFEEAVFGVEKTIEFRR--LETCPACRGSGAEPGTEPVRCPKCGGLGEIRQRAPLFNMVTVTTCDMCRGEGTVIAIPCR--ECRGEGRVRQTRKITVRVPPGVDNSSQIRISGEGDAGPRGGPYGNLYVVIDVQPHP 253          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEFS (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain SBW25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 76/255 (29.80%), Postives = 105/255 (41.18%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYE+LGV + +S+ DLKKAYR+ A+K+HPD+  D     E FKE  +AYE LSDP KR  YDQYG    D             +  DI                        D+ + L+++LE+   GTS  + +   V                      GSG K         +   +G   +QQ    +Q  C  C G G+ I+D      C GE  ++E K L V V  G   G +I    E +   +  P
Sbjct:    6 YYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDSKESEEMFKEANEAYECLSDPNKRAAYDQYGHAGVDPSMGGGGAGFGGQNFSDIFGDVFSDFFGGGRGGQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLV----------------NCKPCDGSGAKKGSSPITCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDP--CDSCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGP 242          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 72/241 (29.88%), Postives = 114/241 (47.30%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYE+LGVSK AS+ ++KKAY++ A+K HPD+  GD E   +FKE+ +AYE+L+D +KR  YDQYG  A ++       A D  DI                        D+ + ++++LE+   G +K++ + +                        QG+G +V +R  G   +QQ   PC  C G G+ I  KD   +C G   ++  K L V +  G   G ++    E +   + +P
Sbjct:    6 YYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGGGA-DFSDI--FGDVFGDIFGGGRRQQRPSRGADLRYSMELTLEEAVRGVTKEIRIPTLETCDICHGSGAKAGTSPVTCSTCQGAG-QVHMRQ-GFFTVQQ---PCPHCHGRGQII--KDSCHKCHGHGRVERYKTLSVKIPAGVDTGDRVRLSGEGEAGAKGAP 236          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 74/246 (30.08%), Postives = 104/246 (42.28%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYE LGV +NAS  D+KKA+R+ A+K HPD+  D     E+FK + +AY+VLSDP+KR  YDQ+G    D             D F                          D+ + L+++LE+   GT  K+ +   V                      GSG K         +    G   +QQ    +Q  C  C+GTG+ I+D  R   C G+  +QE K L V +  G   G +I    E
Sbjct:    6 YYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFGHAGIDPSMGGGGGFGFTGDSFSDIFGDVFGDIFGGGGRRRGRGQRGSDLRYNLELTLEEAVAGTEAKIKVPTWVTCTECG----------------GSGAKKGSAPVTCPTCHGQGAVRMQQGFFSVQQTCPTCRGTGQHISDPCRV--CYGQGRVQETKTLSVKIPPGVDTGDRIRLSGE 233          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_IDILO (Chaperone protein dnaJ OS=Idiomarina loihiensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 74/254 (29.13%), Postives = 110/254 (43.31%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKE--------XXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            +Y++LGVSK+A++ D+KKAY++ A+K HPD+  GD +   KFKE+ QAYEVLSDP+KR++YDQYG +A ++                   F                          D+ + L +SLE+   G + +L +   V                     +GS  +      G   IQ       +Q  C +C+GTG  I D  R   C G    +E K L V +  G   G +I    E +     +P
Sbjct:    6 FYQVLGVSKDANERDIKKAYKRMAMKYHPDRTEGDKDMEIKFKEIKQAYEVLSDPQKRQMYDQYGHEAFEQARQGGAGHGAGGFGGGGADFADIFGDVFGDIFGGGRRQQARAQRGADLRYNLDMSLEEAVRGKTVELEIPTLV----------ECRDCNGSGAKKGSKPQTCGHCHGSGQIQMRQGFFAVQQTCPQCRGTGTIIKDPCR--TCHGHGRKEETKTLSVKIPAGVDTGDRIRLANEGEAGEHGAP 247          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDB (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.621e-18
Identity = 70/236 (29.66%), Postives = 105/236 (44.49%), Query Frame = 2
Query:   83 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK-------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            N  YY++LGVS++AS  ++ KAYRK A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +        +         D  D                         D+ + + +   D   G + ++S SR+                        GSGM    +     MIQ+ Q  C++C G+G  I  +     C G+ V  +K+ L+V V  G  NGQ+I
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQRGADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVCKGSGAEKGTHPITCDKCGGSGMMTITQRSVLGMIQR-QTTCDKCAGSGVII--QHPCHNCHGKGVKTQKQTLQVKVPAGIDNGQQI 236          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDA (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.621e-18
Identity = 70/236 (29.66%), Postives = 105/236 (44.49%), Query Frame = 2
Query:   83 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK-------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            N  YY++LGVS++AS  ++ KAYRK A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +        +         D  D                         D+ + + +   D   G + ++S SR+                        GSGM    +     MIQ+ Q  C++C G+G  I  +     C G+ V  +K+ L+V V  G  NGQ+I
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQRGADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVCKGSGAEKGTHPITCDKCGGSGMMTITQRSVLGMIQR-QTTCDKCTGSGVII--QHPCHNCHGKGVKTQKQTLQVKVPAGIDNGQQI 236          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFA (Chaperone protein dnaJ OS=Xylella fastidiosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 74/240 (30.83%), Postives = 108/240 (45.00%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YY++LGV + AS+DDLKKAYR+ A+K HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A  E       A D  DI                        DV + +++ LE+   G  +++ +   V                     +GSG +V I+      I  MQ  C  C G G  I +  +   C G   +++ K L V +  G  NG +I    E ++ PE  P
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGGGNAPDMNDI-----FGDIFGNIFGGARASRRGADVGYMVELDLEEAVAGVERQIQIPTLVECTHCHGSGSEDGHVETCGTCRGSG-QVRIQR----GIFAMQQTCPHCGGRGVIIRNPCKV--CNGAGRVEDHKTLSVKIPAGVDNGDRIRLSGEGEQGPEGVP 232          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_TREDE (Chaperone protein dnaJ OS=Treponema denticola GN=dnaJ PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 74/252 (29.37%), Postives = 106/252 (42.06%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXA------------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYE+LGV K AS DD+KKAYRK AIK HPDK  GD    EKFKE  +AYE+L D +KR +YDQ+G    D +         A             D F+                         ++ + L++S  D   G   +LS +RN                       GS  ++     G   ++Q      +  PC  C G G  I    +  +C G  + ++K+ + V +  G  NG++IT P +
Sbjct:    8 YYEVLGVDKKASNDDIKKAYRKLAIKYHPDKNQGDKAAEEKFKEATEAYEILIDEKKRSMYDQFGHAGVDGMSGGGGYDPSAFQGFEDIFGGSFSDIFENLFGGGFSSRSSGFGGRHAGPVRGSNLRYDLQISFVDAVYGKKAELSYTRN----------EKCSECHGTGSESGSSKRMCPDCKGTGQVRQSTGFFSISRPCPTCGGEGSIIEKPCK--KCGGNGLERKKQRIIVTIPAGVENGKRITIPSQ 247          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 70/235 (29.79%), Postives = 105/235 (44.68%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETD 778
            YYEIL +SK AS  ++K+AYRK A+K HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +           D FD                         D+ + L+++LE+ + G  K++++ R                        G G   +IR          +  C  C GTG +I D      C G   ++++K L+V + +G  NG +I    E D
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFEDIFD-----TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG---TIRR--QQGFFAFEQTCPVCNGTGYSITDP--CDACYGNGKVKKQKTLKVKIPEGVDNGDRIRLQGEGD 228          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ROSS11.241e-1828.52Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_PSEFS1.241e-1829.80Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_PHOLL1.241e-1829.88Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ_METCA1.241e-1830.08Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_IDILO1.241e-1829.13Chaperone protein dnaJ OS=Idiomarina loihiensis GN... [more]
DNAJ_LACDB1.621e-1829.66Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_LACDA1.621e-1829.66Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_XYLFA2.117e-1830.83Chaperone protein dnaJ OS=Xylella fastidiosa GN=dn... [more]
DNAJ_TREDE2.117e-1829.37Chaperone protein dnaJ OS=Treponema denticola GN=d... [more]
DNAJ_FRATU2.117e-1829.79Chaperone protein dnaJ OS=Francisella tularensis G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
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