EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728912_ssr299 microsatellite EY728912_ssr299:299..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:77..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 70/235 (29.79%), Postives = 105/235 (44.68%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETD 778
            YYEIL +SK AS  ++K+AYRK A+K HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +           D FD                         D+ + L+++LE+ + G  K++++ R                        G G   +IR          +  C  C GTG +I D      C G   ++++K L+V + +G  NG +I    E D
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFEDIFD-----TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG---TIRR--QQGFFAFEQTCPVCNGTGYSITDP--CDACYGNGKVKKQKTLKVKIPEGVDNGDRIRLQGEGD 228          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: YR260_MIMIV (DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R260 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 67/221 (30.32%), Postives = 105/221 (47.51%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD-RXPQCKGEKVIQEKKVLEVIV 727
            ++T  YEILG++ +AS++D+KKAYRK AIK HPDK  G+P   E FK++  A  +LS+ EKR +YDQYGE+A+         + DP  +                              ++SL+D +   + K++++ +                      +G G+ V+    GP  IQQ+Q  C+ C+G       KD   P CKG  + + ++  EV V
Sbjct:    4 ESTDLYEILGLTPSASEEDIKKAYRKLAIKYHPDKNKGNPEAEEMFKKINHANSILSNSEKRRVYDQYGEEAVNN--GLNEDSFDPMSMFMRMHQPGNKKLRAQMRH------------QISLQDYFTKKTVKVTITVDSKCDDCDATGFSDKQKHVCKVCRGKGIVVNEIRNGP-FIQQIQQHCHGCQGKKYDTTAKDLHCPSCKGAGINKSEEETEVNV 209          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 69/242 (28.51%), Postives = 103/242 (42.56%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+    C G  V   ++ LEV +  G  NG ++
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRV 229          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_THICR (Chaperone protein dnaJ OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 71/246 (28.86%), Postives = 104/246 (42.28%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKV--SIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YYEIL VS  AS+ ++KKAYRK A++ HPD+  D E    KFKE ++AYEVLSD +KR+ YDQ+G   +             F                          D+ + L+VSLED   GT+  + +    +                     GS ++   + + +G   +QQ    +   C  C GTG+ +  K     C+GE      K L V +  G  NG +I    E +     +P
Sbjct:    6 YYEILEVSATASEGEIKKAYRKLAMRYHPDRNPDDEEAEDKFKEASEAYEVLSDAQKRQAYDQFGHAGVDGSAGQGGFGGGGFADFGDIFGDIFGGGFGGGHRGPQPGSDLQYELEVSLEDAVAGTTVDVRIPTKEL----------CESCDGSGAEPGSDVQTCPTCQGIGQVRVQQGFFAVSRTCPNCHGTGKLV--KTPCKTCRGEGYKHSSKTLSVKIPAGVDNGDRIRLQGEGEAGEPGAP 239          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 72/244 (29.51%), Postives = 106/244 (43.44%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH-----------DPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNV----IXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKIT 760
            YY+ILGV ++AS  ++KKAYRK A++ HPD+   DPE   KFKE ++AYEVLSDPEKR+ YDQ+G D +                      D F                          D+   L ++LE++  GT K L L + +                          G+G    IR +  S+  Q+ +  PC  C+G G  I+  +    C GE  +Q ++ + + V  G   G  +T
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGVDSGAGGGRRGRGRGFHDIEDIFDAFSDIFGGAPGGGRGRGRSERGRGRPGSDLRVSLSLTLEEIAEGTEKNLRLQKYLECESCDGTGAEGGMGGQNFSMCPKCDGTG---EIRQVSRSVFGQVVNVQPCPRCEGEGRIID--NLCDDCGGEGRVQGEESISINVPPGVMEGNYLT 243          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_FRATH2.117e-1829.79Chaperone protein dnaJ OS=Francisella tularensis s... [more]
YR260_MIMIV2.765e-1830.32DnaJ-like protein R260 OS=Acanthamoeba polyphaga m... [more]
DNAJ_ACIBY2.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT2.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS2.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC2.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB52.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB32.765e-1828.51Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_THICR3.611e-1828.86Chaperone protein dnaJ OS=Thiomicrospira crunogena... [more]
DNAJ_SALRD3.611e-1829.51Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
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