EY728912

Overview
NameEY728912
Unique NameEY728912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728912_ssr299 microsatellite EY728912_ssr299:299..313. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:77..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 70/241 (29.05%), Postives = 105/241 (43.57%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE---------XXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKV--SIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGV KNAS D++KKAYRK A+K+HPD+  D     EKFKE+ +AYE+LSDPEK+  YDQYG   +                  A    DI                        D+ + +++SLE   +G   ++ +                          GS ++   +   +G   + Q    MQ  C +C G+G+ I       +C G+  ++ +K LEV +  G   G +I
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFGGGGFGGGGFAEAFGDIFGDIFGQAAGGGRRGGGPQAYRGADLRYSMEISLEQAAHGHEAQIRVPH----------WDDCEHCHGNGAEPGSSVETCPTCNGVGQVRVSQGFFTMQQTCPKCHGSGKFI--PKPCTKCHGQGKLKSQKTLEVKIPAGIDEGMRI 234          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 70/262 (26.72%), Postives = 112/262 (42.75%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALK------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSG-MKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSPV--TWICSTTERHP 835
            YYE+LGV +NAS+ ++KKAYRK AIK HPDK  GD    +KFKE+++AY +LSD ++R IYDQYG   L                  PF+                        +D+ + L ++ E+   G   K+ + R+                       QG+G ++V   +        +  PC EC G G+ I+      +C G   ++ K+ L + +  G   G ++    E +      P    ++  + + HP
Sbjct:    6 YYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGGSYSSGGFGGTPFEDLFGDIFGDIFGGRGSQRSRGRRGDDLRYNLSINFEEAAFGLETKIQIPRHQTCGTCDGIGAKPGTTPRVCPTCQGAGQVRVQQGYF------SLTRPCPECNGEGQIIDQP--CEECHGSGRVRGKRTLSLKIPAGVETGSRLKLSSEGEPGLNGGPPGDLYVVISVQDHP 259          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_METTH (Chaperone protein dnaJ OS=Methanobacterium thermoautotrophicum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 69/241 (28.63%), Postives = 102/241 (42.32%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG---------EDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEE 772
            YYEILGV + A + ++KKAYR+ A K HPD   DP   EKFKE+++AY VLSD EKR  YD++G         ED           +   FDI                        D+ + L +SLED YNG    + +                         Q  G    +R +  +++ QM +   C +C+G G  +  +     C G+ V+++   + V V  G   G ++  P E
Sbjct:    6 YYEILGVDRGADKKEIKKAYRRLARKYHPDVSDDPDAAEKFKEISEAYAVLSDDEKRARYDRFGHAGMDGFSQEDIFNNINFEDIFSGLGFDI---GNIFDMFGFGGGRRHGPQRGADISYTLDISLEDAYNGLETDIRVPHT--KKCPVCHGSRAEPGTGTRTCQTCGGSGQVRQVRNTILGQMMNITTCPDCQGEGTVV--EKPCSNCNGKGVVRKTSTIHVKVPAGVETGSRLRVPGE 239          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_DIAST (Chaperone protein dnaJ OS=Diaphorobacter sp. (strain TPSY) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 73/233 (31.33%), Postives = 105/233 (45.06%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            +YE+LGV KNAS D+LKKAYRK A+K HPD+  GD      EKFKE  +AYE+LSD +KR  YDQYG   +           + F    +                         D+ + + V+LE+   G   ++ + S                        QGSG  V +R  G   +QQ    C  C+GTG+ I   +    C G+  ++++K LEV +  G  +G +I
Sbjct:    6 FYEVLGVPKNASDDELKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGARGRGGRQVYRGNDLSYAMDVTLEEAAKGKEAQIRIPSWESCETCHGSGAKPGTSAKTCGTCQGSG-TVQMRQ-GFFSVQQ---TCPHCRGTGKII--PEPCTACHGQGRVKKQKTLEVKIPAGIDDGMRI 231          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFM (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 73/240 (30.42%), Postives = 108/240 (45.00%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETDEAPELSP 799
            YY++LGV + AS+DDLKKAYR+ A+K HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A  E       A D  DI                        DV + +++ LE+   G  +++ +   V                     +GSG +V I+      I  MQ  C  C G G  I +  +   C G   +++ K L V +  G  NG +I    E ++ P+  P
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAF-EHGVGGGNAPDMNDI-----FGDIFGNIFGGARASRRGADVGYMVELDLEEAVAGVERQIQIPTLVECTHCNGSGSEDGHVETCGTCRGSG-QVRIQR----GIFAMQQTCPHCGGRGVIIRNPCKV--CNGAGRVEDHKTLSVKIPAGVDNGDRIRLSGEGEQGPDGVP 232          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 70/235 (29.79%), Postives = 105/235 (44.68%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETD 778
            YYEIL VSK AS  ++K+AYRK A++ HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +           D FD                         D+ + L+++LE+ + G  K++++ R                        G G   +IR          +  C  C GTG +I D      C G   ++++K L+V + +G  NG +I    E D
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFEDIFD-----TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG---TIRR--QQGFFAFEQTCPVCNGTGYSITDP--CDACYGNGKVKKQKTLKVKIPEGVDNGDRIRLQGEGD 228          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 68/251 (27.09%), Postives = 111/251 (44.22%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF------DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL------GPSMIQ------QMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKITFPEETD 778
            YYEILGV++      LK A+RK A++ HPD+  GD E   KFKE+ +AYEVL DP+KR  YD++G  A +            F      DI                        D+ + ++V+LE+ ++G + ++++  +V+                    +GSG K   +        G   ++       ++  C  C G GETI  KD  P+C+G + +++ + L V +  G  +  +I    E D
Sbjct:    5 YYEILGVTRECDDKKLKSAFRKLAMQYHPDRNAGDKEAERKFKEIGEAYEVLKDPQKRAAYDRFGHAAFENNNNGGGSPFSGFSAGGFADIFEDFFGEIMGGGHRKRSDGRERGADLSYNMEVTLEEAFSGKTAQINIPSSVV----------------CDACEGSGAKKGSKPQTCGTCHGAGRVRAAQGFFSIERTCPVCHGRGETI--KDPCPKCQGTRRVEKNRSLSVNIPAGIEDSTRIRLSGEGD 237          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 63/228 (27.63%), Postives = 100/228 (43.86%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA---HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            YYE+LGVSK+AS+D++KKAYRK + K HPD   + G  EKFKE+ +AYE LSD +KR  YDQ+G     +              F                          D+ + + +S ED   G    + + R                        G   ++++    P      +  C+ C+GTG+ I  K++   C G+  I+++K + V +  G  +GQ++
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIFGGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTGKII--KNKCADCGGKGKIKKRKKINVTIPAGVDDGQQL 231          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNAJ_ACISJ (Chaperone protein dnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 71/233 (30.47%), Postives = 106/233 (45.49%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRXPQCKGEKVIQEKKVLEVIVEKGDANGQKI 757
            +YE+LGV KNAS D++KKAYRK A+K HPD+  GD      EKFKE  +AYE+LSD +KR  YDQYG   +           + F    +                         D+ + ++++LE+   G   ++ + S                        QGSG  V +R  G   +QQ    C  C+GTG+ I   +    C G+  ++++K LEV +  G  +G +I
Sbjct:    6 FYEVLGVPKNASDDEIKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGARGRGGRQVYRGNDLSYAMEITLEEAAKGKEAQIRIPSWESCETCHGSGAKPGTSAKTCGTCQGSG-TVQMRQ-GFFSVQQ---TCPHCRGTGKII--PEPCTACHGQGRVKKQKTLEVKIPAGIDDGMRI 231          
BLAST of EY728912 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 289
            YY+ LG+++ AS D++K+AYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK
Sbjct:    5 YYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73          
The following BLAST results are available for this feature:
BLAST of EY728912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_RALME3.611e-1829.05Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_PELCD3.611e-1826.72Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_METTH3.611e-1828.63Chaperone protein dnaJ OS=Methanobacterium thermoa... [more]
DNAJ_DIAST3.611e-1831.33Chaperone protein dnaJ OS=Diaphorobacter sp. (stra... [more]
DNAJ_XYLFM4.717e-1830.42Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_FRATW4.717e-1829.79Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_BARHE4.717e-1827.09Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
DNAJ_BACSU4.717e-1827.63Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]
DNAJ_ACISJ4.717e-1830.47Chaperone protein dnaJ OS=Acidovorax sp. (strain J... [more]
DNJB1_MOUSE6.160e-1857.97DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728912 ID=EY728912; Name=EY728912; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGCGTCTACTCTGAAGCTCTGAAATTTTTTAGTACAAGA
AGCTGTTCGGAAGCGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAA
TCAATGACAAGGATCGCTNGCCACAATGTAAGGGTGAGAAAGTCATTCAG
GAGAAAAAAGTCTTGGAGGTTATTGTTGAAAAGGGGGATGCAAATGGACA
GAAGATTACGTTCCCTGAAGAAACTGATGAAGCGCCCGAACTGTCACCGG
TGACATGGATTTGTTCTACCACAGAAAGACACCCGAAATTAAGCGAAAGG
GTGATGACCTATGGTTGAGCCCACCTGGTCCTGACAGA
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