EY728906

Overview
NameEY728906
Unique NameEY728906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.656e-71
Identity = 132/241 (54.77%), Postives = 164/241 (68.05%), Query Frame = 2
Query:   32 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            +I    F   +SSV    GW+ AHATFY              YGNLY+ GY TNTAALSTALFN+G SCG C+QI+C     PQWCL+G SI +TATNFCPP        GGWC+PP  HFD++QP F  IA+Y+AGIVP++Y++V C+R+GG+RFTING +YF LVLI+NV G G++  V IKGS++ KW+ MSRNWG    SN+YLNGQSLSF V  S G    + NV P  W FGQ++
Sbjct:   11 MIFSTMFFMKISSVSA--GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.784e-68
Identity = 124/223 (55.61%), Postives = 154/223 (69.06%), Query Frame = 2
Query:   86 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYT 721
            G  N HATFY              YG+LYS GYGT TAALSTALFN+G SCG C++I C  A D +WCL+G S+++TATNFCPP        GGWC+PP  HFD++QP ++ I  YR GIVPV+++RV C + GG+RF ING  YF LV I NVGGAG +++VSIKGS+T W  MSRNWG    SN+YL+GQ+LSF +TT+ G + V  NV P  WSFGQ Y+
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.203e-67
Identity = 130/221 (58.82%), Postives = 146/221 (66.06%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYT 721
            W  A ATFY              YG+LY  GYGT TAALSTALFN G SCGACF I C     QWC  G SI VTATNFCPP        GGWC+PP  HFD+SQP ++ IA YRAGIVPV YRRV C+R+GGIRF +NGHSYF LVL+TNVGG+G V  + IKGS T W  MSRNWG    SN+ L+GQ+LSF V    G  V + +VAP  WSFG TYT
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYT 245          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 5.464e-67
Identity = 128/251 (51.00%), Postives = 165/251 (65.74%), Query Frame = 2
Query:   41 CVGFLSLVSSVQGYG--------GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY-TGRQF 733
            C  FL+L+++   +         GW  A ATFY              YG+LYS GYGTNTAALST LFN+G SCG C++IMC    D ++C+ G S+ +TATN CPP        GGWC+PP  HFD+++P +  I  Y  GIVPV+Y+RV C + GG+RFTING  YF LVL++NVGG G +++VSIKGSRT W  MSRNWG    SN+YL+GQSLSF VT+S G ++   +VAP  W+FGQT+ T +QF
Sbjct:   10 CARFLALLATCLLWNEAASFTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQQF 260          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.590e-66
Identity = 119/223 (53.36%), Postives = 152/223 (68.16%), Query Frame = 2
Query:   86 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            GW+ AHATFY              YGNLY+QGYGT TAALSTALFN+GL+CG C++++C    D  WC  G S+ +TATNFCPP        GGWC+PP  HFD++QP ++ I  YR GI+PVIY+RV C + GG+RFTINGH YF LVL+TNVG AG ++A+ +KGS++  W  M+ NWG +  S +YL GQ LSF VT + G ++V  NV  P W FGQT+
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTF 255          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.712e-66
Identity = 121/225 (53.78%), Postives = 156/225 (69.33%), Query Frame = 2
Query:   92 INAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYT-GRQF 733
            ++  ATFY              YGNLYS GYGTNTAALS+ALFN+G +CG C+QI C  ++ +WC  G S+ +TATN CPP        GGWC+PP  HFD++QP ++ I  YR GIVPV ++RV C R GG+RFTING+SYF LVLITNVGG G +++V IKG++T W  MSRNWG    +N+YLN Q++SF VT++ G ++V  +VAP  W FGQT+T G QF
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 3.542e-66
Identity = 116/219 (52.97%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W +A ATFY              YG+L+ QGYG  TAALSTALFN G +CGAC+QIMC NDPQWCL GS+ +TATNFCPP      G WC+PP  HFDLS P+F  IAQY+AG+VPV YRR+ C R GG++F   G+ YF ++L  NVGGAGD++ + +KG +T W  M +NWG    +   L GQ +SF VTTS G +    NV P  W FGQT+ G+
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 266          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 6.041e-66
Identity = 122/248 (49.19%), Postives = 161/248 (64.92%), Query Frame = 2
Query:   29 WVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYT-GRQFD 736
            + +L        +S    GGW++  ATFY              YGNLY+QGYG   AALSTALFN G SCG C+ IMC  +  P+WC  G+ + +TATN CPP        GGWC+PP  HFD+SQP ++ I  YRAGIVPV+Y++V+C R GG+RFT++G +YF LVLITNV G+G V+A+S+KGS+T W P++RNWG     NS L GQ+LSF VT++ G ++   +V P  W FG T+T  +QFD
Sbjct:    7 FAVLAAALCITSASAAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQQFD 254          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 1.030e-65
Identity = 119/225 (52.89%), Postives = 148/225 (65.78%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W  AHATFY              YGNLYSQGYGT  AALSTALFN+G SCG C++I C     PQWC  G ++ +TATNFCPP        GGWC+PP  HFD++QP ++ I  Y AGI+PVIY+RV C + GG+RFTINGH YF LVL+TNV  AG ++++ + GS T  W PM+RNWG +  S +YL GQ LSF VT +   ++V  NV PP W FGQT+  +
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASK 263          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.296e-65
Identity = 115/219 (52.51%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W +A ATFY              YG+L+ QGYG  TAALSTALFN G +CGAC+QIMC +DPQWCL G+I +TATNFCPP      G WC+PP  HFDLS P+F  IAQY+AG+VPV YRR+ C R GG++F   G+ YF ++L  NVGGAGD++ + +KG +T W  M +NWG    +   L GQ +SF VTTS G +    NV P  W FGQT+ G+
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGK 273          
The following BLAST results are available for this feature:
BLAST of EY728906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
EXP17_ARATH3.656e-7154.77Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP11_ARATH3.784e-6855.61Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXPA8_ORYSJ3.203e-6758.82Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA1_ORYSJ5.464e-6751.00Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP13_ORYSJ1.590e-6653.36Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ2.712e-6653.78Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ARATH3.542e-6652.97Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP28_ORYSJ6.041e-6649.19Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ORYSJ1.030e-6552.89Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ARATH2.296e-6552.51Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728906 ID=EY728906; Name=EY728906; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGGAAAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGT
TTCTCTCATTGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCT
CATGCAACTTTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGC
TTGTGGGTACGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAG
CACTTAGCACTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTT
CAAATTATGTGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCAT
TGTCACTGCCACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTA
ACCACCACTTTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTAT
AGAGCTGGTATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAA
TGGGGGCATAAGGTTCACAATCAATGGCCATTCTTACTTCAATTTAGTTC
TAATAACAAACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCATCAAA
GGTTCAAGGACTAAATGGCAACCGATGTCGAGAAACTGGGGCCCAAAACT
GGCAAGCAACTCGTATCTTAATGGACAAAGCCTCTCTTTTGTTGTGACCA
CAAGTTATGGCCACAGTGTTGTTTCTTACAATGTTGCCCCTCCTAAGTGG
TCATTTGGGCAGACTTATACCGGCAGACAATTCGATATTAGGCTTATTTA
AGTTAAAATCAGCAACCCTTTTAGTATTTTAATTAGCTCTAGCGATATGG
GTGCGTACAAATAATTCTGAATTGGCCCTATGTGCTTTATACCTTTTGAA
AGTGTTGCTGCGTTTTCATCTTTACTGAATGTG
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