EY728906

Overview
NameEY728906
Unique NameEY728906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11791 contig Csv1_Contig11791:1..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-19
Identity = 72/239 (30.13%), Postives = 108/239 (45.19%), Query Frame = 2
Query:   47 GFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHS--YFNLVLITNVGGAGDVRAVSIKGSR--TKWQPMSRNWGPKLASNSYLN---GQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            G  S +S  +GYG W +  AT+Y              Y +   Q  + +  AA   +LF NG  CG+C+QI C  + + C    + V  T+ C PGG C     HFD+S   F  +A          AG++ + Y+RV C+    + F ++  S  Y+  +L+    G GD+ AV I  +R    W+ M ++WG     NS          S  +T+  G  +V+ NV P  W  G TY
Sbjct:   32 GRRSTMSLGRGYG-WSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC-PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 73/228 (32.02%), Postives = 109/228 (47.81%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFTI-----NGHSYFNLVLITNVGGAGDVRAVSI--KGSRTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYT 721
            W N  AT+Y              Y     Q  + +  AA S +++ +GL CG+C+Q+ C+ +   C    + V  T+ C PGG C     HFDLS   F  +A      Q R AG++ + Y RV C   GG+  T      +  SYF  VL+    G GD+  + +   G+   W PM ++WG   KL++ + L    LS  +T+S G ++V+ NV P  W  G +YT
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQA-PLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 73/226 (32.30%), Postives = 103/226 (45.58%), Query Frame = 2
Query:   86 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIN--GHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSL----SFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            GW  A AT+Y              Y     Q  + +  AA S +L+  G  CGAC+++ C  +   C      V  T+ CP GG C     HFD+S      +A+         AGI+ V YRRV CK +G  I F ++   + ++  VLI    G GD+ AV +  +   W PM +NWG     NS   G++L    S  +T+  G  +V+ NV P  W  G TY
Sbjct:   63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP-GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 69/226 (30.53%), Postives = 106/226 (46.90%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFT----INGHSYFNLVLITNVGGAGDVRAVSI--KGSRTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            W N  AT+Y              Y G ++   + +  AA S +++ +GL CG+C+Q+ C  +   C    + V  T+ C PGG C     HFDLS   F  +A      Q R AG++ + Y RV C   GG++ T    +  +  +  VL+    G GD+  V +   G+   W  M ++WG   KL + S L     S  +T+S G ++V+ NV P  W  G +Y
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQA-PFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 70/227 (30.84%), Postives = 103/227 (45.37%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNVGGAGDVRAVSIK--GSRTKWQPMSRNWGPK-LASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W+ A AT+Y              YG L   +       A++  LF NG  CGAC+++ C  D   C R ++ V  T+ CP    C   + HFDLS  VF  +A           G++PVIYRR  CK  G  I F +N  S  ++  +L+    G GD+ ++ I+  G+R +W  M   WG         L G     + T S G ++ + +V P  W+   TY+ R
Sbjct:   36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECP---GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAR-EWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSR 257          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 66/226 (29.20%), Postives = 100/226 (44.25%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTINGHS--YFNLVLITNVGGAGDVRAVSIKGSRTK-WQPMSRNWGPK-LASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W+ A AT+Y              YG+L   + +     A+S  LF  G  CGAC+++ C  D   C + ++ + AT+  P G      + HFDLS   F H+A           G++ ++YRR  CK  G  I F +N  S  Y+  +LI    G GD+ ++ I+ + +K W  M   WG         L G     + T S   ++ + +V P  W    TYT R
Sbjct:   40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL-DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSR 264          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 70/226 (30.97%), Postives = 99/226 (43.81%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-GGAGDVRAVSIK-GSRTKWQPMSRNWGPKLA-SNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W  A AT+Y              YG L       T   A+S  LF  G  CGAC+++ C  D   C R ++ V  T+ C PGG C     HFDLS   F  +A           G + V+YRR  CK  G  I F +N G + F L L+     G GD+ ++ +K  +  +WQ M   WG   + +   L G     + T +   ++ + +V P  W+   TYT R
Sbjct:   45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIVTDEC-PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYTSR 268          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 67/225 (29.78%), Postives = 102/225 (45.33%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTINGHSYFN--LVLITNVGGAGDVRAVSIKGS--RTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTY 718
            W  A +T+Y              YGN  +Q  +    +A   +LF +G  CGAC+Q+ C +    C +  + V  T+ CP    C   + HFDLS   F  +A      Q R  G + ++Y++V C   G  + F ++  S  N   VL+  V G G++  + +K +    KW  MS++WG   KL  +S L       V +   G +VV+ NV P  W  G  Y
Sbjct:   47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSKNPVTVVITDECP---GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIY 267          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16
Identity = 72/251 (28.69%), Postives = 108/251 (43.03%), Query Frame = 2
Query:   65 SSVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWC-LRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTI--NGHSYFNLVLITNVGGAGDVRAVSIKGSRTK-----------WQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTG-RQFD 736
            SS  G GGW+NA AT+Y               G  N+    +   T+  +  LF +G  CG+C+QI C   P    L  ++I+T  N+ P         +HFDLS   F  +A+         AGI+ + +RRV C+  G  + F +    +  +  +L+    G GDV  V +  SR             W PM  +WG   +L +N  L G   S  +T   G ++++  V P  W     Y+   QFD
Sbjct:   84 SSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQPNTVYSSIVQFD 327          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 70/226 (30.97%), Postives = 97/226 (42.92%), Query Frame = 2
Query:   89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRA-------GIVPVIYRRVRCKRNG-GIRFTIN-GHSYFNLVLITNV-GGAGDVRAVSIK-GSRTKWQPMSRNWGPK-LASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727
            W  A AT+Y              YG+L           ++S  LF +G  CGAC+++ C  D   C R ++ V  T+ C PGG C     HFDLS   F  +A   A       G + V+YRR  CK  G  I F +N G + F L L+     G GD+ ++ IK  +  +W  M   WG         L G     + T S   ++ + +V P  W    TYT R
Sbjct:   48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC-PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSR 271          
The following BLAST results are available for this feature:
BLAST of EY728906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
EXPB5_ORYSJ7.236e-1930.13Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB18_ORYSJ9.451e-1932.02Expansin-B18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB11_ORYSJ2.105e-1832.30Expansin-B11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB15_ORYSJ6.126e-1830.53Expansin-B15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB3_ARATH8.000e-1830.84Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 ... [more]
EXPB1_ARATH6.773e-1729.20Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 ... [more]
EXB16_ORYSJ1.155e-1630.97Expansin-B16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB2_ARATH5.733e-1629.78Putative expansin-B2 OS=Arabidopsis thaliana GN=EX... [more]
EXPB7_ORYSJ7.488e-1628.69Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB17_ORYSJ2.845e-1530.97Expansin-B17 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728906 ID=EY728906; Name=EY728906; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGGAAAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGT
TTCTCTCATTGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCT
CATGCAACTTTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGC
TTGTGGGTACGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAG
CACTTAGCACTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTT
CAAATTATGTGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCAT
TGTCACTGCCACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTA
ACCACCACTTTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTAT
AGAGCTGGTATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAA
TGGGGGCATAAGGTTCACAATCAATGGCCATTCTTACTTCAATTTAGTTC
TAATAACAAACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCATCAAA
GGTTCAAGGACTAAATGGCAACCGATGTCGAGAAACTGGGGCCCAAAACT
GGCAAGCAACTCGTATCTTAATGGACAAAGCCTCTCTTTTGTTGTGACCA
CAAGTTATGGCCACAGTGTTGTTTCTTACAATGTTGCCCCTCCTAAGTGG
TCATTTGGGCAGACTTATACCGGCAGACAATTCGATATTAGGCTTATTTA
AGTTAAAATCAGCAACCCTTTTAGTATTTTAATTAGCTCTAGCGATATGG
GTGCGTACAAATAATTCTGAATTGGCCCTATGTGCTTTATACCTTTTGAA
AGTGTTGCTGCGTTTTCATCTTTACTGAATGTG
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