EY728897

Overview
NameEY728897
Unique NameEY728897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728897 vs. ExPASy Swiss-Prot
Match: NAMA_BACLD (NADPH dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=namA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11
Identity = 61/209 (29.19%), Postives = 89/209 (42.58%), Query Frame = 3
Query:   15 GGKIVPQLWHVGSVRRI-GTEPDASVPAYGPTEKLKDGNVVVH-GMTVQDXXXXXXXXXXXXXXXXSIGMDGVEIHGAHGYLVDQFFWEGTNQRTDEYGGSLANRSRFAIELIQAIRAAVGPDFPIILRFSQWKQQDYTARLVQTPEALAEFLKPLSDPGVDIFHCSTRRFWEPEFEGSELNLAGWTRKLTGKPTITVGSVGLNGEFLQ 635
            G K   QL H G    + GT        YGP+    D N      MT +D                + G D +EIHGAHGYL+++F    +N+R DEYGGS  NR R   E+I A++       P+ +R S     DY  + +   + +  F K + + GVD+   S+      +         G+   +  +  I  G+VGL    LQ
Sbjct:   97 GSKTAIQLAHAGRKAEVEGT-------IYGPSAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAVKEVWAG--PLFVRVS---ASDYKTKGLDVADYVG-FAKWMKEQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQ 292          
BLAST of EY728897 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 52/183 (28.42%), Postives = 73/183 (39.89%), Query Frame = 3
Query:    6 HAEGGKIVPQLWHVGSVRR---------IGTEPDASVP--AYGPTEKLKDGN-VVVHGMTVQDXXXXXXXXXXXXXXXXSIGMDGVEIHGAHGYLVDQFFWEGTNQRTDEYGGSLANRSRFAIELIQAIRAAVGPDFPIILRF--SQWKQQDYTARLVQTPEALAEFLKPLSDPGVDIFHCST 512
            H++  KI  QL H G             + TE         YGP E   D N    H +T +                  IG D +EIHGAHGYL+       TN R D+YGG+   R  F +E++ ++R A+    P+  R   + W  +     +  T    A     L D GVD+   S+
Sbjct:  120 HSQNQKIGIQLAHAGRKASTTAPYRGYTVATEAQGGWENDVYGPNEDRWDENHAQPHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAIPDSMPLFYRVTATDWLPKGQGWEIEDTVALAAR----LRDGGVDLIDVSS 298          
The following BLAST results are available for this feature:
BLAST of EY728897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
NAMA_BACLD5.301e-1129.19NADPH dehydrogenase OS=Bacillus licheniformis (str... [more]
OYEC_SCHPO6.923e-1128.42Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728897 ID=EY728897; Name=EY728897; organism=Citrus sinensis; type=EST; length=733bp
CGGTACACGCCGAAGGCGGCAAGATCGTCCCGCAACTGTGGCATGTGGGC
AGCGTACGACGCATCGGCACCGAGCCGGATGCCAGCGTGCCAGCCTATGG
TCCGACTGAAAAACTCAAGGACGGCAACGTCGTCGTCCACGGCATGACCG
TGCAAGACATCAAGGACGTGATCGCTGCGTTCGCCCAAGCCGCCAAGGAT
GCACAAAGCATCGGCATGGATGGCGTGGAAATCCACGGCGCCCACGGTTA
CCTGGTGGACCAGTTCTTCTGGGAAGGCACCAACCAGCGCACCGACGAAT
ACGGCGGCAGCCTGGCCAACCGTTCGCGTTTCGCCATCGAATTGATCCAG
GCCATCCGCGCCGCCGTGGGCCCGGACTTCCCGATCATCTTGCGTTTCTC
CCAGTGGAAGCAGCAGGATTACACCGCGCGCCTGGTGCAAACCCCGGAAG
CGCTGGCTGAGTTCCTCAAGCCGCTGTCTGACCCGGGCGTGGATATTTTC
CACTGTTCCACCCGCCGTTTCTGGGAGCCGGAATTCGAAGGCTCCGAGCT
GAACCTGGCGGGCTGGACCCGCAAGCTCACCGGCAAGCCAACCATCACCG
TGGGCAGCGTCGGCCTGAACGGCGAATTCCTGCAGTTCATGGTCAACCCG
ACAAAGTGTGGCGCAACCGCCATCCTGAAAAACTGCTGGACCGTCTGAAA
ACGACGAATTTGATCTGGTCGCCGTGGGCCCGC
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