EY728896

Overview
NameEY728896
Unique NameEY728896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 79/172 (45.93%), Postives = 110/172 (63.95%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            MGRG++E+KRIEN  +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS  GKL+EF SS+SM KTL RY      +  P ++ +   +    +  L LK     LQ    ++ G+ L  L+ KEL+ LE+QL+ SL  +R  +   +   L E + KEQ     N+TL+++
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDL-LKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQ 170          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.287e-31
Identity = 75/173 (43.35%), Postives = 110/173 (63.58%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            MGRG++ ++RI++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +SSSM   ++RY K      E       A E+   Q+E   L+    ALQ + R ++GE+L  L+  EL SLE Q+++SL+ IR  + Q +   + EL  K  L+ + N  L ++
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKI---EQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRK 169          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30
Identity = 74/173 (42.77%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ-KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            M RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E  ++ +M   +ERYQ     G  EP    R+ +   ++Q    L+   + LQR  R+  G   G +   +L +LE+ L++ + QIR+T+ Q M   +  L++KE +L EAN+ L+++
Sbjct:    1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEK 170          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30
Identity = 73/172 (42.44%), Postives = 109/172 (63.37%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 528
            MGRG++ ++RI+N  +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G+LYEF SS++M   ++RY      A E  +      E+   Q+E   L+ +   LQ S + L+GEEL  L  ++L+ LE +L++SL+ IR  +   +   + EL  K  L+ + N  L +
Sbjct:    1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYT----NAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSR 167          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30
Identity = 78/172 (45.35%), Postives = 111/172 (64.53%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            MGRG++E+KRIEN  +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS  GKL+E+ SS+ M +TL RY   N+ +   + +  +  E+        LK +   LQ     L G+ L PL  KEL+SLE+QL  +L  +R  + + + + L E + KEQ     N+TL+++
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDI------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQ 163          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29
Identity = 73/171 (42.69%), Postives = 108/171 (63.16%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKC-NYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522
            MGRG++E+KRIEN  NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS +  L+ L E+YQ   N    E N   +  LE++      ++K   E L+   R   G++L  L   ++  LE+QL+ S+ ++R+ + Q +   L  L+ KEQ+L + N  L
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFL 165          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29
Identity = 76/173 (43.93%), Postives = 110/173 (63.58%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            MGRG++ +++I++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN  KLY+F +SSS+  T+ER+   N    E       A E+   Q+E   L+    +LQ + R L G EL  L+ KEL+++E QL+MSL+ IR  R Q + + + EL  K  L+   N  L ++
Sbjct:    1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRK 169          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28
Identity = 74/172 (43.02%), Postives = 108/172 (62.79%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 528
            MGRG++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS   SM + + RY +   GA  P    R  L      E  K++     LQ S +   G++L     +EL  LE+QL+ +L +IR+ + + M   +  L+  E++L + N  + Q
Sbjct:    4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQ 170          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRFD 537
            MGR ++E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S  GKLY F S  +++K L+RY K +         A +   L  Q + L   + YE L+     L+G  +  ++   L  LE  L+ +L   R+ +T+ ML  +  L+ KE++L E N+ L  + +
Sbjct:    1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQH---------ADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQME 165          
BLAST of EY728896 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.849e-28
Identity = 69/173 (39.88%), Postives = 107/173 (61.85%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 531
            M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS  GKLY+  ++ +M + +ERY+     A     +A     +  +QE + LK     LQ+  R + G      +  +EL +LER L++ +  IRS + Q M+  +  L+ KE +L  AN+ L+++
Sbjct:    1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169          
The following BLAST results are available for this feature:
BLAST of EY728896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL15_BRANA6.345e-3145.93Agamous-like MADS-box protein AGL15 OS=Brassica na... [more]
AGL21_ARATH8.287e-3143.35Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
MAD33_ORYSJ1.414e-3042.77MADS-box transcription factor 33 OS=Oryza sativa s... [more]
MAD57_ORYSJ5.372e-3042.44MADS-box transcription factor 57 OS=Oryza sativa s... [more]
AGL15_ARATH9.162e-3045.35Agamous-like MADS-box protein AGL15 OS=Arabidopsis... [more]
M17_MAIZE1.197e-2942.69MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=... [more]
AGL17_ARATH1.197e-2943.93Agamous-like MADS-box protein AGL17 OS=Arabidopsis... [more]
FBP24_PETHY1.323e-2843.02MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24... [more]
FLC_ARATH2.257e-2840.23MADS-box protein FLOWERING LOCUS C OS=Arabidopsis ... [more]
MAD26_ORYSJ3.849e-2839.88MADS-box transcription factor 26 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728896 ID=EY728896; Name=EY728896; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGGAAAATGGGAAGGGGTAGGGTTGAGTTGAAGAGGATAGA
GAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAATGGCCTAT
TGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGGTTGCTCTC
ATCATTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCAGTAGTTCAAG
CATGCTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTATGGAGCACCAG
AACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAGCCAGCAAGAA
TATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGATCCCAAAGGAA
TCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCTTGAGTCAC
TTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATCAACAAGAACT
CAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGGAACAGTTGCT
GAGCGAAGCAAATAAGACCCTCAAACAAAGGTTTGATGGAGGGATACCAA
GTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGGGCT
TAAACCAGCTCAACCTCAGGGCGATACCTTCTTTCACGCCTTGGAATGTG
AACCCACATTGCAAATTGGATACCAGCCTGCGGAACCAATATCGGTTGTC
ACAGCAGGCCCGAGTCTGAATAATACATGCNAGGATGGCTACATGCNTAG
AGAGCGGCGGGCATTACAGTCATGTATTGCCGTTGATCCCATAGATCANC
AACTTGTATCCCTTGTAAGCACCCTATTCGTGACTAGGAACAGCAATCAT
AGGATTATTATAATACTCTACAGTGATCCTGCCTTA
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