EY728866

Overview
NameEY728866
Unique NameEY728866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX8B_XENLA (Probable glutathione peroxidase 8-B OS=Xenopus laevis GN=gpx8-B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S C  T +NY  L +L+ ++      +LAFPCNQFG  EPG N++I+  A   +   FP+F K+ + G  A P Y+ L  S         +WNF K+LVD +G VV+ + P  +  SI  ++  L+
Sbjct:   77 SGCPHTEANYRSLQELHREFGPSHFTVLAFPCNQFGESEPGTNKEIEAMAKRNYGVTFPVFSKIKILGSEAEPAYRFLVDST----KKEPRWNFWKYLVDPQGQVVKYWRPDETAESIRPEVASLV 198          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX8A_XENLA (Probable glutathione peroxidase 8-A OS=Xenopus laevis GN=gpx8-A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S C    +NY  L +L+ ++      +LAFPCNQFG  EPG N++I   A   +   FP+F K+ + G  A P Y+ L  S         +WNF K+LVD +G VV+ + P  +  SI  ++  L+
Sbjct:   77 SGCPHAEANYRSLQELHREFGPSHFTVLAFPCNQFGESEPGTNQEIGALAKRNYGVTFPMFSKIKILGSEAEPAYRFLVDST----KKEPRWNFWKYLVDPQGQVVKYWRPDETAESIRPEVASLV 198          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX8_BOVIN (Probable glutathione peroxidase 8 OS=Bos taurus GN=GPX8 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.184e-17
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S C LT+ NY  L +L+ ++      +LAFPCNQFG  EP  ++++  FA   F   FPIF K+ + G  A P ++ L  S         +WNF K+LV+ EG VV+ + P      I  +I  L+
Sbjct:   77 SDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEVVSFARNNFGVTFPIFHKIKILGSEAEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKTWRPEEPIEVIRPEIAALI 198          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX8_HUMAN (Probable glutathione peroxidase 8 OS=Homo sapiens GN=GPX8 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S C LT+ NY  L +L+ ++      +LAFPCNQFG  EP  +++++ FA   +   FPIF K+ + G    P ++ L  S         +WNF K+LV+ EG VV+ + P      I  DI  L+
Sbjct:   77 SDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALV 198          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX1_RAT (Glutathione peroxidase 1 OS=Rattus norvegicus GN=Gpx1 PE=1 SV=4)

HSP 1 Score: 86.2705 bits (212), Expect = 2.381e-16
Identity = 54/150 (36.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T  +YTE++ L  +   +GL +L FPCNQFG QE G NE+I       R    F+  F +F+K +VNG+ A PL+  L+++      D                    I WNF KFLV  +G  V RY+     + IE DI+ LL
Sbjct:   45 SLUGTTTRDYTEMNDLQKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRNALPAPSDDPTALMTDPKYIIWSPVCRNDISWNFEKFLVGPDGVPVRRYSRRFRTIDIEPDIEALL 194          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX1_MOUSE (Glutathione peroxidase 1 OS=Mus musculus GN=Gpx1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSK-------------------GGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T  +YTE++ L  +   +GL +L FPCNQFG QE G NE+I       R    F+  F +F+K +VNG+ A PL+  L+++                      +  + I WNF KFLV  +G  V RY+     + IE DI+ LL
Sbjct:   45 SLUGTTIRDYTEMNDLQKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRNALPTPSDDPTALMTDPKYIIWSPVCRNDIAWNFEKFLVGPDGVPVRRYSRRFRTIDIEPDIETLL 194          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX8_MOUSE (Probable glutathione peroxidase 8 OS=Mus musculus GN=Gpx8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S C  T+ +Y  L +L+ ++      +LAFPCNQFG  EP  +++++ FA   +   FPIF K+ + G  A P ++ +  S         +WNF K+LV+ EG VV+ + P     +I   + +++
Sbjct:   77 SDCRFTDKSYQTLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFARQNYGVTFPIFHKIKILGPEAEPAFRFIVDSS----KKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI 198          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX5_MACFA (Epididymal secretory glutathione peroxidase OS=Macaca fascicularis GN=GPX5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 3
Query:   30 CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFG------------DSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            CGLT + Y EL+ L ++ K  GL +L FPCNQFG QEPGDN++I       R    F   F +F+K DVNG+    ++  LK S      + G              I+WNF KFLV  +G  V R++   +  S++ DI   L+
Sbjct:   73 CGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 216          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX5_HUMAN (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 3
Query:   30 CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFG------------DSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            CGLT + Y EL+ L ++ K  GL +L FPCNQFG QEPGDN++I       R    F   F +F+K DVNG+    ++  LK S      + G              I+WNF KFLV  +G  V R++   +  S++ DI   L+
Sbjct:   73 CGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 216          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX2_RAT (Glutathione peroxidase 2 OS=Rattus norvegicus GN=Gpx2 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15
Identity = 52/151 (34.44%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            S  G T  +YT+L++L  ++  + L +L FPCNQFG QE   NE+I       R    F+  F +  K DVNG N  P++ +LK      + D                    + WNF KFL+  EG    RY+ T   ++IE DIK+LL+
Sbjct:   38 SLUGTTTRDYTQLNELQCRFPRR-LVVLGFPCNQFGHQENCQNEEILNSLKYVRHGGGFQPTFSLTQKCDVNGQNQHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFQTINIEPDIKRLLK 187          
The following BLAST results are available for this feature:
BLAST of EY728866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
GPX8B_XENLA1.948e-1836.51Probable glutathione peroxidase 8-B OS=Xenopus lae... [more]
GPX8A_XENLA2.813e-1735.71Probable glutathione peroxidase 8-A OS=Xenopus lae... [more]
GPX8_BOVIN8.184e-1736.51Probable glutathione peroxidase 8 OS=Bos taurus GN... [more]
GPX8_HUMAN1.069e-1635.71Probable glutathione peroxidase 8 OS=Homo sapiens ... [more]
GPX1_RAT2.381e-1636.00Glutathione peroxidase 1 OS=Rattus norvegicus GN=G... [more]
GPX1_MOUSE1.182e-1535.33Glutathione peroxidase 1 OS=Mus musculus GN=Gpx1 P... [more]
GPX8_MOUSE1.543e-1531.75Probable glutathione peroxidase 8 OS=Mus musculus ... [more]
GPX5_MACFA3.439e-1537.24Epididymal secretory glutathione peroxidase OS=Mac... [more]
GPX5_HUMAN3.439e-1537.24Epididymal secretory glutathione peroxidase OS=Hom... [more]
GPX2_RAT3.439e-1534.44Glutathione peroxidase 2 OS=Rattus norvegicus GN=G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728866 ID=EY728866; Name=EY728866; organism=Citrus sinensis; type=EST; length=840bp
CCACGCGTCCGCCCACGCGTCCGTCACAGTGTGGCTTGACCAATTCAAAC
TACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGAATCAAGGCTTGGA
GATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAAGAGCCAGGAGACA
ATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAAGGCTGAGTTTCCC
ATATTTGATAAGGTTGATGTTAATGGTGATAATGCTGCTCCTTTATACAA
GCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGACAGCATCAAGTGGA
ACTTTTCCAAGTTCTTGGTGGATAAGGAGGGGAATGTTGTTGAGCGTTAT
GCCCCCACCACTAGCCCTCTGAGCATTGAGAAGGATATAAAGAAACTTCT
GGAGACTGCTTAACCGCTGCTACAACTTGCATGATCAGCTTCTTGCTAAT
AAAACTAGAGTATCATGCTGTAGAAGCACTCTGGTGGAAATATATGTTTA
GCTTTGTCTCAATATCTGTAGACATATAATGAAGTTTCCTAATGTCGAAG
TAAATTCAGTTGATAAGTGCTTGGTTTGTATGTAATGAATGTTCCCAGTT
TTTGTAATTCAAAATAAAAGGTGCTTGGTGAGACTCTACNGANNANANNN
NANNNNANNNANNANNNAAAAANAAGGGGGCCGTCTAGAGGATCACTTAG
TACGCTGCTGCGAGTCTACTCTCTTATGTACTAATCATCATGGCGCGTTA
ACTCTGATGGAACTGCGTACCATATCCTGCACATCCCTCGCGTGTATACG
AAGCGACGATGCTCACTGCACAGAGACAGCCGTGTCGCTC
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