EY728866

Overview
NameEY728866
Unique NameEY728866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX3_BOVIN (Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.802e-14
Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR-------FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGD------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 389
            S  GLT   Y EL+ L ++ +  GL IL FPCNQFG QEPG+N +I   A  +       F   F +F+K DVNG+     Y  LK+S      L G              I+WNF KFLV  +G  + R+   T+  S++ DI
Sbjct:   71 SYUGLTGQ-YVELNALQEELEPFGLVILGFPCNQFGKQEPGENSEI--LATLKYVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGSPDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTVNSVKMDI 211          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX5_PIG (Epididymal secretory glutathione peroxidase OS=Sus scrofa GN=GPX5 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.965e-14
Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   30 CGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGD------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            CGLT + Y EL+ L ++ K  GL +L FPCNQFG QEPG+N +I       R    +   F +F+K DVNG+    ++  LK S      L G              I+WNF KFLV  +G  V R+   T   +++ DI   L+
Sbjct:   71 CGLT-AQYPELNTLQEELKPFGLVVLGFPCNQFGKQEPGENSEILLGLKYVRPGGGYVPNFQLFEKGDVNGEKEQKVFTFLKHSCPHPSELIGSIGYISWEPIRVHDIRWNFEKFLVGPDGVPVMRWVHETPISTVKSDILAYLK 214          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX1_PONPY (Glutathione peroxidase 1 OS=Pongo pygmaeus GN=GPX1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.965e-14
Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS-------------------IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T  +YT++++L  +   +GL +L FPCNQFG QE   NE+I       R    F+  F +F+K +VNG  A PL+  L+ +      D+                   + WNF KFLV  +G  + RY+     + IE DI+ LL
Sbjct:   45 SLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX1_HYLLA (Glutathione peroxidase 1 OS=Hylobates lar GN=GPX1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.965e-14
Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS-------------------IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T  +YT++++L  +   +GL +L FPCNQFG QE   NE+I       R    F+  F +F+K +VNG  A PL+  L+ +      D+                   + WNF KFLV  +G  + RY+     + IE DI+ LL
Sbjct:   45 SLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX1_HUMAN (Glutathione peroxidase 1 OS=Homo sapiens GN=GPX1 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.965e-14
Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDS-------------------IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T  +YT++++L  +   +GL +L FPCNQFG QE   NE+I       R    F+  F +F+K +VNG  A PL+  L+ +      D+                   + WNF KFLV  +G  + RY+     + IE DI+ LL
Sbjct:   45 SLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX_MCV1 (Glutathione peroxidase OS=Molluscum contagiosum virus subtype 1 GN=GPX1 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.485e-14
Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-----QEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 401
            S  G T   YT++++L  +   +GL +L FPCNQFG QE   N +I            F+  F +F+K +VNG  A PL+  L+ +      D                    + WNF KFLV  +G  V RY+     L++E DI+ LL
Sbjct:   62 SLUGSTVREYTQMNELQRRLGARGLVVLGFPCNQFGHQENAQNAEILPSLKHVRPGNGFEPNFMLFEKCEVNGARAHPLFAFLREALPAPSDDMSTLVSDPQLIAWSPVCRNDVAWNFEKFLVGADGTPVRRYSHRCQTLAVEPDIEALL 211          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX3_PONPY (Glutathione peroxidase 3 OS=Pongo pygmaeus GN=GPX3 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 54/142 (38.03%), Postives = 71/142 (50.00%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGDS------------IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 389
            S  GLT   Y EL+ L ++    GL IL FPCNQFG QEPG+N +I       R    F   F +F+K DVNG+     Y  LK+S      L G S            I+WNF KFLV  +G  + R+   T+  +++ DI
Sbjct:   71 SYUGLTGQ-YIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDI 211          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX3_HUMAN (Glutathione peroxidase 3 OS=Homo sapiens GN=GPX3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 54/142 (38.03%), Postives = 71/142 (50.00%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSS---KGGLFGDS------------IKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDI 389
            S  GLT   Y EL+ L ++    GL IL FPCNQFG QEPG+N +I       R    F   F +F+K DVNG+     Y  LK+S      L G S            I+WNF KFLV  +G  + R+   T+  +++ DI
Sbjct:   71 SYUGLTGQ-YIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDI 211          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX2_PONPY (Glutathione peroxidase 2 OS=Pongo pygmaeus GN=GPX2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFAC-----TRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            S  G T  ++T+L++L  ++  + L +L FPCNQFG QE   NE+I          + ++  F +  K +VNG N  P++ +LK      + D                    + WNF KFL+  EG    RY+ T   ++IE DIK+LL+
Sbjct:   38 SLUGTTTRDFTQLNELQCRFPRR-LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGSGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLK 187          
BLAST of EY728866 vs. ExPASy Swiss-Prot
Match: GPX2_MOUSE (Glutathione peroxidase 2 OS=Mus musculus GN=Gpx2 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14
Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 3
Query:   24 SQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQI-QEFACTR----FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGD-------------------SIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLLE 404
            S  G T  +Y +L++L  ++  + L +L FPCNQFG QE   NE+I       R    ++  F +  K DVNG N  P++ +LK      + D                    + WNF KFL+  EG    RY+ +   ++IE DIK+LL+
Sbjct:   38 SLUGTTTRDYNQLNELQCRFPRR-LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFSLTQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRSFQTINIEPDIKRLLK 187          
The following BLAST results are available for this feature:
BLAST of EY728866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
GPX3_BOVIN3.802e-1437.50Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=... [more]
GPX5_PIG4.965e-1436.55Epididymal secretory glutathione peroxidase OS=Sus... [more]
GPX1_PONPY4.965e-1433.33Glutathione peroxidase 1 OS=Pongo pygmaeus GN=GPX1... [more]
GPX1_HYLLA4.965e-1433.33Glutathione peroxidase 1 OS=Hylobates lar GN=GPX1 ... [more]
GPX1_HUMAN4.965e-1433.33Glutathione peroxidase 1 OS=Homo sapiens GN=GPX1 P... [more]
GPX_MCV16.485e-1432.67Glutathione peroxidase OS=Molluscum contagiosum vi... [more]
GPX3_PONPY8.469e-1438.03Glutathione peroxidase 3 OS=Pongo pygmaeus GN=GPX3... [more]
GPX3_HUMAN8.469e-1438.03Glutathione peroxidase 3 OS=Homo sapiens GN=GPX3 P... [more]
GPX2_PONPY8.469e-1431.79Glutathione peroxidase 2 OS=Pongo pygmaeus GN=GPX2... [more]
GPX2_MOUSE8.469e-1432.45Glutathione peroxidase 2 OS=Mus musculus GN=Gpx2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728866 ID=EY728866; Name=EY728866; organism=Citrus sinensis; type=EST; length=840bp
CCACGCGTCCGCCCACGCGTCCGTCACAGTGTGGCTTGACCAATTCAAAC
TACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGAATCAAGGCTTGGA
GATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAAGAGCCAGGAGACA
ATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAAGGCTGAGTTTCCC
ATATTTGATAAGGTTGATGTTAATGGTGATAATGCTGCTCCTTTATACAA
GCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGACAGCATCAAGTGGA
ACTTTTCCAAGTTCTTGGTGGATAAGGAGGGGAATGTTGTTGAGCGTTAT
GCCCCCACCACTAGCCCTCTGAGCATTGAGAAGGATATAAAGAAACTTCT
GGAGACTGCTTAACCGCTGCTACAACTTGCATGATCAGCTTCTTGCTAAT
AAAACTAGAGTATCATGCTGTAGAAGCACTCTGGTGGAAATATATGTTTA
GCTTTGTCTCAATATCTGTAGACATATAATGAAGTTTCCTAATGTCGAAG
TAAATTCAGTTGATAAGTGCTTGGTTTGTATGTAATGAATGTTCCCAGTT
TTTGTAATTCAAAATAAAAGGTGCTTGGTGAGACTCTACNGANNANANNN
NANNNNANNNANNANNNAAAAANAAGGGGGCCGTCTAGAGGATCACTTAG
TACGCTGCTGCGAGTCTACTCTCTTATGTACTAATCATCATGGCGCGTTA
ACTCTGATGGAACTGCGTACCATATCCTGCACATCCCTCGCGTGTATACG
AAGCGACGATGCTCACTGCACAGAGACAGCCGTGTCGCTC
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