EY728837 | Citrus Genome Database

Overview


Name	EY728837
Unique Name	EY728837
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	901

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 2.635e-73
Identity = 114/179 (63.69%), Postives = 142/179 (79.33%), Query Frame = 2

Query:   44 IQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            IQ HRET+ADIT++ +P+D++RA+ FGLMKID  GR+I+FSEKPKGE L  M+VDTT+LGL  E+A   PYIASMGIYV  KDV++ LL++      DFG E+IP A S    VQAYL+D YWEDIGTIEAFYNANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IG
Sbjct:  136 IQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPKGEALTKMRVDTTVLGLTPEQAASQPYIASMGIYVFKKDVLIKLLKESLE-RTDFGKEIIPDA-SKDHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIG 312

HSP 2 Score: 56.225 bits (134), Expect = 2.635e-73
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DGCGQEVFGLQGYCSIWYWQNSHIKRAII 785
            +GEGC++KNC+I HSV+G+RS I  G +IE++LLMG+        ++    +G   +    ++ I+RAII
Sbjct:  311 IGEGCILKNCRIQHSVLGVRSRIETGCVIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAII 380

HSP 3 Score: 25.7942 bits (55), Expect = 2.635e-73
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = 3

Query:   12 DHLYRMDYERLF--RHTE 59
            DHLYRMDY RLF  RH E
Sbjct:  125 DHLYRMDY-RLFIQRHRE 141

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 7.293e-73
Identity = 109/180 (60.56%), Postives = 145/180 (80.56%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVI 577
            E IQ HRET ADIT++ +P+DEKRA++FGLMKID+  R+++FSEKPKGE L+ M+VDT+ILGL  ++A++ PYIASMGIY+ +++V+  LLR   P   DFG E+IPGA +    +QAYLY GYWEDIGTIEAFY +NL +T++P P FSFYD  APIYT+PRYLPP+K+L+  +T+S+I
Sbjct:  134 EYIQRHRETKADITLSVVPIDEKRASSFGLMKIDDNARVVDFSEKPKGEALRQMQVDTSILGLSPDQARKNPYIASMGIYIFNREVLGKLLRQN-PEQTDFGKEIIPGAKT-DYNLQAYLYKGYWEDIGTIEAFYESNLALTQQPQPPFSFYDEKAPIYTRPRYLPPTKVLNCTITESMI 311

HSP 2 Score: 51.6026 bits (122), Expect = 7.293e-73
Identity = 19/37 (51.35%), Postives = 30/37 (81.08%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            + EGC++K+C+IHHSV+G+RS +     IED++LMG+
Sbjct:  311 ISEGCILKDCRIHHSVLGIRSRVESDCTIEDSMLMGA 347

HSP 3 Score: 29.261 bits (64), Expect = 7.293e-73
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIGRILTSR 774
            L GADYYE+   R+ +   G VP GIG   T R
Sbjct:  344 LMGADYYESSTKRKAVLEAGKVPQGIGAGTTIR 376

HSP 4 Score: 25.7942 bits (55), Expect = 7.293e-73
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 3

Query:   12 DHLYRMDY-ERLFRHTE 59
            DHLYRMDY E + RH E
Sbjct:  125 DHLYRMDYREYIQRHRE 141

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 7.582e-73
Identity = 113/179 (63.13%), Postives = 141/179 (78.77%), Query Frame = 2

Query:   44 IQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            IQ HRET+ADIT++ +P+D++RA+ FGLMKID  GR+I+FSEKPKGE L  M+VDTT+LGL  E+A   PYIASMGIYV  KDV++ LL++      DFG E+IP A      VQAYL+D YWEDIGTIEAFYNANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IG
Sbjct:  136 IQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFSEKPKGEALTKMRVDTTVLGLTPEQAASQPYIASMGIYVFKKDVLIKLLKEALE-RTDFGKEIIPDAAK-DHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIG 312

HSP 2 Score: 55.4546 bits (132), Expect = 7.582e-73
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DGCGQEVFGLQGYCSIWYWQNSHIKRAII 785
            +GEGC++KNC+I HSV+G+RS I  G +IE++LLMG+        ++    +G   +    ++ I+RAII
Sbjct:  311 IGEGCILKNCRIQHSVLGVRSRIETGCMIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAII 380

HSP 3 Score: 25.7942 bits (55), Expect = 7.582e-73
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = 3

Query:   12 DHLYRMDYERLF--RHTE 59
            DHLYRMDY RLF  RH E
Sbjct:  125 DHLYRMDY-RLFIQRHRE 141

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 9.487e-73
Identity = 112/181 (61.88%), Postives = 143/181 (79.01%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            + IQ HR+T ADIT++ +P+DE+RA+ FGLMKID+ GRII+FSEKPKGE L  M+VDT++LGL  E+A++ PYIASMGIYV  K+V+  LLR+      DFG E+IP A S    VQAYL+D YWEDIGTIEAFY+ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  +T+S+IG
Sbjct:  134 QFIQRHRDTGADITLSVIPIDERRASDFGLMKIDDSGRIIDFSEKPKGEALTQMQVDTSVLGLTKEQAQKQPYIASMGIYVFKKEVLFKLLRESVE-RTDFGKEIIPDA-SKDYNVQAYLFDDYWEDIGTIEAFYHANLALTQQPQPPFSFYDEHAPIYTRARYLPPTKLLDCQITESIIG 312

HSP 2 Score: 56.225 bits (134), Expect = 9.487e-73
Identity = 22/37 (59.46%), Postives = 32/37 (86.49%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            +GEGC++KNC+I HSV+G+RS I  G +IE++LLMG+
Sbjct:  311 IGEGCILKNCRIQHSVLGVRSRIESGCVIEESLLMGA 347

HSP 3 Score: 25.0238 bits (53), Expect = 9.487e-73
Identity = 10/27 (37.04%), Postives = 16/27 (59.26%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIG 756
            L GAD+Y+   +R+    +  +P GIG
Sbjct:  344 LMGADFYQASVERQCSLIENDIPVGIG 370

HSP 4 Score: 24.2534 bits (51), Expect = 9.487e-73
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3

Query:   12 DHLYRMDYERLF-RHTE 59
            DHLYRMDY +   RH +
Sbjct:  125 DHLYRMDYRQFIQRHRD 141

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.675e-72
Identity = 111/181 (61.33%), Postives = 147/181 (81.22%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            + ++ HRET+ADIT++ +P+D+++A   GLMKID +GRI +FSEKP+GE L+AM+VDT++LGL  E+AK  PYIASMGIYV  K+V+ NLL +K+ GA DFG E+IP + S    +QAYL+D YWEDIGTIEAFY ANL +TK+P PDFSFY+  APIYT+ RYLPP+KML++ VT+S+IG
Sbjct:  144 QFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFSEKPQGEALRAMQVDTSVLGLSAEKAKLNPYIASMGIYVFKKEVLHNLL-EKYEGATDFGKEIIPDSAS-DHNLQAYLFDDYWEDIGTIEAFYEANLALTKQPSPDFSFYNEKAPIYTRGRYLPPTKMLNSTVTESMIG 322

HSP 2 Score: 59.3066 bits (142), Expect = 1.675e-72
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DGCGQEVFGLQGYCSIWYWQNSHIKRAII 785
            +GEGC+IK C+IHHSV+G+RS I     IEDTL+MG+        ++    +G  +      + I+RAII
Sbjct:  321 IGEGCMIKQCRIHHSVLGIRSRIESDCTIEDTLVMGNDFYESSSERDTLKARGEIAAGIGSGTTIRRAII 390

HSP 3 Score: 24.6386 bits (52), Expect = 1.675e-72
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:   12 DHLYRMDYERLF-RHTE 59
            DHLYRMDY +   RH E
Sbjct:  135 DHLYRMDYAQFVKRHRE 151

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.088e-72
Identity = 117/180 (65.00%), Postives = 141/180 (78.33%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVI 577
            E IQ HR+T ADIT++ +P+ EK A AFGLMKID  GR+++FSEKP GE LKAM+VDT  LGLD E+AKE PYIASMGIYV  K V+L+LL++      DFG E+IP A      VQAYL+D YW DIGTIEAFY ANLG+TK+PIP FSFYD  APIYT+ RYLPP+K+L+ADVT+S+I
Sbjct:  134 EFIQRHRDTGADITLSVVPVGEKVAPAFGLMKIDANGRVVDFSEKPTGEALKAMQVDTQSLGLDPEQAKEKPYIASMGIYVFKKQVLLDLLKEG-KDKTDFGKEIIPDAAK-DYNVQAYLFDDYWADIGTIEAFYEANLGLTKQPIPPFSFYDEKAPIYTRARYLPPTKVLNADVTESMI 311

HSP 2 Score: 53.5286 bits (127), Expect = 2.088e-72
Identity = 20/37 (54.05%), Postives = 30/37 (81.08%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            + EGC+IKNC+IHHSV+G+R+ +     IEDT++MG+
Sbjct:  311 ISEGCIIKNCRIHHSVLGIRTRVEADCTIEDTMIMGA 347

HSP 3 Score: 24.2534 bits (51), Expect = 2.088e-72
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3

Query:   12 DHLYRMDY-ERLFRHTE 59
            DHLYRMDY E + RH +
Sbjct:  125 DHLYRMDYREFIQRHRD 141

HSP 4 Score: 24.2534 bits (51), Expect = 2.088e-72
Identity = 13/33 (39.39%), Postives = 17/33 (51.52%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIGRILTSR 774
            + GADYY+    R+    +G  P GIG   T R
Sbjct:  344 IMGADYYQPYEKRQDCLRRGKPPIGIGEGTTIR 376

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.940e-69
Identity = 109/181 (60.22%), Postives = 140/181 (77.35%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            + IQ HR+T+ADIT++ LP+DEKRA+ FGLMK+D  GR++EFSEKPKG++L+AM+VDTTILGLD   A   P+IASMGIYV  +DV+++LL    P   DFG EVIP A +     QA+L++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IG
Sbjct:  135 QFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPKGDELRAMQVDTTILGLDPVAAAAQPFIASMGIYVFKRDVLIDLL-SHHPEQTDFGKEVIPAAAT-RYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIG 313

HSP 2 Score: 46.9802 bits (110), Expect = 1.940e-69
Identity = 18/37 (48.65%), Postives = 28/37 (75.68%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            +GEGC++K C + +SV+G+RS I    +I+D LLMG+
Sbjct:  312 IGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGA 348

HSP 3 Score: 28.4906 bits (62), Expect = 1.940e-69
Identity = 16/33 (48.48%), Postives = 17/33 (51.52%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIGRILTSR 774
            L GAD+YET   R      G VP GIG   T R
Sbjct:  345 LMGADFYETSELRHQNRANGKVPMGIGSGSTIR 377

HSP 4 Score: 24.2534 bits (51), Expect = 1.940e-69
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3

Query:   12 DHLYRMDYERLF-RHTE 59
            DHLYRMDY +   RH +
Sbjct:  126 DHLYRMDYSQFIQRHRD 142

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.940e-69
Identity = 109/181 (60.22%), Postives = 140/181 (77.35%), Query Frame = 2

Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            + IQ HR+T+ADIT++ LP+DEKRA+ FGLMK+D  GR++EFSEKPKG++L+AM+VDTTILGLD   A   P+IASMGIYV  +DV+++LL    P   DFG EVIP A +     QA+L++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IG
Sbjct:  135 QFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFSEKPKGDELRAMQVDTTILGLDPVAAAAQPFIASMGIYVFKRDVLIDLL-SHHPEQTDFGKEVIPAAAT-RYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIG 313

HSP 2 Score: 46.9802 bits (110), Expect = 1.940e-69
Identity = 18/37 (48.65%), Postives = 28/37 (75.68%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            +GEGC++K C + +SV+G+RS I    +I+D LLMG+
Sbjct:  312 IGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGA 348

HSP 3 Score: 28.4906 bits (62), Expect = 1.940e-69
Identity = 16/33 (48.48%), Postives = 17/33 (51.52%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIGRILTSR 774
            L GAD+YET   R      G VP GIG   T R
Sbjct:  345 LMGADFYETSELRHQNRANGKVPMGIGSGSTIR 377

HSP 4 Score: 24.2534 bits (51), Expect = 1.940e-69
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3

Query:   12 DHLYRMDYERLF-RHTE 59
            DHLYRMDY +   RH +
Sbjct:  126 DHLYRMDYSQFIQRHRD 142

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.853e-69
Identity = 109/179 (60.89%), Postives = 135/179 (75.42%), Query Frame = 2

Query:   44 IQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            I  HR T AD+TVAALP+D K+A AFGLM+ DE+GRI+EF EKPKG+ L  M VDT+  GL  E AKE PY+ASMGIYV S+D + +LL    P   DFG EVIP A   G R+++Y++D YWEDIGTI AFY ANL +T++P P FSFYD   PIYT+PRYLPPSK++D+ +TDS+IG
Sbjct:  137 INHHRSTGADLTVAALPVDAKQAEAFGLMRTDEDGRILEFREKPKGDSLLEMAVDTSRFGLSAESAKERPYLASMGIYVFSRDTLFDLLHQN-PTHKDFGKEVIPEALQRGDRLKSYVFDDYWEDIGTIGAFYEANLALTQQPTPPFSFYDAEFPIYTRPRYLPPSKLVDSQITDSIIG 314

HSP 2 Score: 55.4546 bits (132), Expect = 7.853e-69
Identity = 25/70 (35.71%), Postives = 44/70 (62.86%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DGCGQEVFGLQGYCSIWYWQNSHIKRAII 785
            +GEG ++K+C IHHSV+G+RS + +  +++D+LLMGS        + V   +G   +   + + +KRAI+
Sbjct:  313 IGEGSILKSCSIHHSVLGVRSRVEDEVVLQDSLLMGSDFFESSSERAVLRERGGIPLGVGKGTTVKRAIL 382

HSP 3 Score: 22.3274 bits (46), Expect = 7.853e-69
Identity = 8/14 (57.14%), Postives = 8/14 (57.14%), Query Frame = 3

Query:   12 DHLYRMDYERLFRH 53
            D LYRMDY     H
Sbjct:  126 DQLYRMDYSLFINH 139

[Close]

BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP4 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glgC PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 3.226e-65
Identity = 98/179 (54.75%), Postives = 134/179 (74.86%), Query Frame = 2

Query:   44 IQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 580
            +  HR+T+ADIT++ LP++E+ A++FGL+++D  GR+  FSEKP+GE L  M+VDTT  GL    A   PY+ASMGIYV ++ V+++LL+   P + DFG E+IP A +    VQ YL++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+PRYLPPSK+LD  VT+S+IG
Sbjct:  136 VNRHRDTNADITLSVLPVEEQVASSFGLLQVDHSGRVTAFSEKPQGEALTRMRVDTTDFGLTPAEAAHKPYLASMGIYVFNRQVLIDLLKQS-PQSTDFGKEIIPMAAT-DHNVQTYLFNDYWEDIGTISSFYEANLALTRQPQPPFSFYDEKAPIYTRPRYLPPSKLLDCQVTESIIG 312

HSP 2 Score: 53.9138 bits (128), Expect = 3.226e-65
Identity = 21/37 (56.76%), Postives = 31/37 (83.78%), Query Frame = 3

Query:  576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGS 686
            +GEGC++KNC+I HSV+G+RS I  G +I++ LLMG+
Sbjct:  311 IGEGCILKNCQIQHSVLGVRSRIESGCVIDNALLMGA 347

HSP 3 Score: 24.6386 bits (52), Expect = 3.226e-65
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 3

Query:   12 DHLYRMDYERLF--RHTE 59
            DHLYRMDY RLF  RH +
Sbjct:  125 DHLYRMDY-RLFVNRHRD 141

HSP 4 Score: 24.2534 bits (51), Expect = 3.226e-65
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 1

Query:  676 LWGADYYETDADRRFLGCKGIVPFGIG 756
            L GAD+Y+  A+R        VP GIG
Sbjct:  344 LMGADFYQPFAERDHKIKNNSVPLGIG 370

The following BLAST results are available for this feature:

BLAST of EY728837 vs. ExPASy Swiss-Prot

BLAST of EY728837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310


Match Name	E-value	Identity	Description
GLGC_ANAVT	2.635e-73	63.69	Glucose-1-phosphate adenylyltransferase OS=Anabaen...	[more]
GLGC_CYAP7	7.293e-73	60.56	Glucose-1-phosphate adenylyltransferase OS=Cyanoth...	[more]
GLGC_ANASP	7.582e-73	63.13	Glucose-1-phosphate adenylyltransferase OS=Anabaen...	[more]
GLGC_NOSP7	9.487e-73	61.88	Glucose-1-phosphate adenylyltransferase OS=Nostoc ...	[more]
GLGC_SYNY3	1.675e-72	61.33	Glucose-1-phosphate adenylyltransferase OS=Synecho...	[more]
GLGC_SYNP2	2.088e-72	65.00	Glucose-1-phosphate adenylyltransferase OS=Synecho...	[more]
GLGC_SYNP6	1.940e-69	60.22	Glucose-1-phosphate adenylyltransferase OS=Synecho...	[more]
GLGC_SYNE7	1.940e-69	60.22	Glucose-1-phosphate adenylyltransferase OS=Synecho...	[more]
GLGC_SYNPW	7.853e-69	60.89	Glucose-1-phosphate adenylyltransferase OS=Synecho...	[more]
GLGC_CYAP4	3.226e-65	54.75	Glucose-1-phosphate adenylyltransferase OS=Cyanoth...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-009-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY728837 ID=EY728837; Name=EY728837; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGATCATTTGTACCGAATGGACTATGAGAGATTATTCAGG
CACACAGAGAAACTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGAT
GAAAAACGGGCTACTGCTTTTGGTCTGATGAAGATCGATGAAGAGGGACG
CATAATTGAATTTTCTGAGAAACCAAAAGGAGAGCAACTTAAAGCTATGA
AGGTTGATACCACCATATTAGGTCTTGATGATGAGAGAGCTAAAGAGATG
CCTTACATAGCAAGTATGGGTATTTATGTCATCAGCAAAGATGTGATGTT
AAATCTGCTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAG
TTATCCCTGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATAT
GATGGCTACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAA
TCTGGGGATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTT
CTGCTCCAATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTT
GATGCTGATGTCACTGATAGTGTAATTGGGTGAAGGCTGTGTGATTAAGA
ATTGCAAAATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAA
GGTGCAATTATCGAAGATACTTTACTTATGGGGAGCAGATTATTATGAGA
CGGATGCGGACAGGAGGTTTTTGGGCTGCAAGGGTATTGTTCCATTTGGT
ATTGGCAGAATTCTCACATCAAGAGAGCCATAATCCACANNATGCTCGAA
TGGGGGATTATGTGAAAATTCTTCACAGTGACAGTGTGCAAAAACCACCA
GGGAAACAGATGGATACTCATCAAAACCGGGATTGTTCCATAATCAGGAT
G