EY728837
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_METFK (Glucose-1-phosphate adenylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.164e-20 Identity = 67/199 (33.67%), Postives = 104/199 (52.26%), Query Frame = 2
Query: 38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLY--------DG--YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML------DADVTDSVI 577
+++ AH AD+TVA + + K A+AFG+M +DE R+++F EKP + L D + A +ASMGIYV + + L D ++DFG ++IP RV A+ + DG YW D+GT++A++ AN+ +T K +P+ + YDR PI+T LPP+K + TDS+I
Sbjct: 149 QMLAAHVRNKADMTVACINVPLKEASAFGVMGVDENDRVVDFEEKP---------AHPSSLPDDPDHA-----LASMGIYVFNAAFLYEQLIRDADDPKSSHDFGHDIIPYLIK-KYRVFAHRFTDSCVGAADGNYYWRDVGTVDAYWEANMELT-KVVPELNLYDRQWPIWTYQEQLPPAKFVFDNEERRGQATDSLI 331 HSP 2 Score: 21.1718 bits (43), Expect = 9.164e-20 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 12 DHLYRMDYERL 44
DH+Y+MDY ++
Sbjct: 140 DHVYKMDYGQM 150
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_LACCB (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain BL23) GN=glgC PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.040e-19 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPP 538
++ H+ A +TVA +P++++ A FG+M D+ RIIEF EKP AK +ASMGIY+ + + L + + DFG +VIP + AY + GYW+D+GTI++ + AN+ P + +R+ I++Q LPP
Sbjct: 137 MLDYHKAKKASLTVAVMPVEKEEAKRFGIMNTDDTDRIIEFEEKP---------------------AKPKSNLASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANMEFL-NPNNPLNIGNRNWRIFSQNEALPP 283 HSP 2 Score: 27.7202 bits (60), Expect = 1.040e-19 Identity = 11/38 (28.95%), Postives = 24/38 (63.16%), Query Frame = 3
Query: 582 EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL 695
+GC + I HS++ I EG++I+D+++M + ++
Sbjct: 299 DGCYVAG-SIQHSILSQNVKIGEGSVIKDSMIMPNAVI 335 HSP 3 Score: 22.3274 bits (46), Expect = 1.040e-19 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 12 DHLYRMDYERL 44
DH+Y+MDY+ +
Sbjct: 127 DHIYKMDYQAM 137
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_LACC3 (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=glgC PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.040e-19 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPP 538
++ H+ A +TVA +P++++ A FG+M D+ RIIEF EKP AK +ASMGIY+ + + L + + DFG +VIP + AY + GYW+D+GTI++ + AN+ P + +R+ I++Q LPP
Sbjct: 137 MLDYHKAKKASLTVAVMPVEKEEAKRFGIMNTDDTDRIIEFEEKP---------------------AKPKSNLASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANMEFL-NPNNPLNIGNRNWRIFSQNEALPP 283 HSP 2 Score: 27.7202 bits (60), Expect = 1.040e-19 Identity = 11/38 (28.95%), Postives = 24/38 (63.16%), Query Frame = 3
Query: 582 EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL 695
+GC + I HS++ I EG++I+D+++M + ++
Sbjct: 299 DGCYVAG-SIQHSILSQNVKIGEGSVIKDSMIMPNAVI 335 HSP 3 Score: 22.3274 bits (46), Expect = 1.040e-19 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 12 DHLYRMDYERL 44
DH+Y+MDY+ +
Sbjct: 127 DHIYKMDYQAM 137
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_JANSC (Glucose-1-phosphate adenylyltransferase OS=Jannaschia sp. (strain CCS1) GN=glgC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.192e-19 Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLL-RDKFP--GANDFGSEVIPGATSIGMRVQAYLYDG----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
+++ H ET AD+TV L + ATAFG+M DE G+I F EKP D + D A +ASMGIYV + LL D ++DFG ++IP G + A+ YD YW+D+GT++AF+ A++ +T PD +D++ PI+T +PP+K +
Sbjct: 142 MLREHVETGADVTVGCLTVPRMEATAFGVMATDETGKITSFLEKP---------ADPPAMPDDPNSA-----LASMGIYVFKWSFLRELLVADALDTNSSHDFGHDLIPEIVENG-KAMAHRYDRSCVRADGAPVYWKDVGTVDAFWEAHIDLTNF-TPDLDLWDKNWPIWTYSESVPPAKFI 308 HSP 2 Score: 25.0238 bits (53), Expect = 1.192e-19 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query: 12 DHLYRMDYERLFR-HTE 59
DH+Y+MDYE + R H E
Sbjct: 132 DHIYKMDYEVMLREHVE 148
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.339e-19 Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD---KFPGANDFGSEVIPGATSIGMRVQAYLY-------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
++ H AD+TV AL + + A FG+M++D + R++EF EKP+ + LDD +ASMGIYV + + L D + +DFG +IPGA +V A+ + D YW D+GT+EA+Y AN+ + P + YDR PI + LPP K +
Sbjct: 157 MVNFHHRKGADVTVGALRVSREEARQFGVMQVDTDNRLVEFQEKPENPRPT----------LDDPDV----CLASMGIYVFNTRFLFERLCDDATQPDSDHDFGKNIIPGAIE-DSQVFAFPFTDENRKRDAYWRDVGTLEAYYEANMDLVGVD-PQLNLYDRQWPIRSFQPQLPPPKFV 320 HSP 2 Score: 22.7126 bits (47), Expect = 1.339e-19 Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 3
Query: 12 DHLYRMDYERL--FRH 53
DHLY+M+YE + F H
Sbjct: 147 DHLYKMNYESMVNFHH 162 HSP 3 Score: 22.3274 bits (46), Expect = 1.339e-19 Identity = 10/32 (31.25%), Postives = 18/32 (56.25%), Query Frame = 3
Query: 582 EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLL 677
+G +I + SV+G I+ A +ED++L
Sbjct: 340 QGAIISGGCVRRSVIGTGCRINSYAQVEDSIL 371
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_ECO27 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glgC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19 Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 2
Query: 53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
H E A TVA +P+ + A+AFG+M +DE +IIEF EKP + ++ +K +ASMGIYV D + LL + N DFG ++IP T G+ AY + + YW D+GT+EA++ ANL + +P+ YDR+ PI T LPP+K +
Sbjct: 156 HVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-----------SMPNDPSKS---LASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGL---AYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLA-SVVPELDMYDRNWPIRTYNESLPPAKFV 319
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BURPP (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=glgC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.550e-19 Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYL----------YDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
+I H E+ AD TV + + A AFG+M +D R+ +F EKP + DT +ASMGIYV S D + +LL + +DFG +++P + G + + YW D+GTI+A++ ANL + IP YDR+ PI+T LPP+K +
Sbjct: 146 MIADHAESGADCTVGCIEVPRMEAVAFGVMHVDANRRVTDFLEKPADPPCIPGRPDTA--------------LASMGIYVFSADYLYSLLEENISTIDTDHDFGKDILPRVVTQGTAIAHPFSMSCVSSDPNVEPYWRDVGTIDAYWAANLDLA-STIPTLDLYDRNWPIWTYQEQLPPAKFV 313 HSP 2 Score: 23.483 bits (49), Expect = 1.550e-19 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 12 DHLYRMDYERL 44
DH+Y+MDY R+
Sbjct: 136 DHIYKMDYTRM 146
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_FERNB (Glucose-1-phosphate adenylyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.551e-19 Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 2
Query: 38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVIS----KDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVI 577
E + H A T+A + + A FG+M D E +IIEF EKPK + +AS+GIYV + K+V++ +D +DFG +IP S G +V AY ++GYW+D+GTI++++ NL + +PIP F+ +D + YT+ + P+ + + +V +S+I
Sbjct: 135 EFVYYHISKGALATIACMEVPITEAHRFGIMVTDIENKIIEFQEKPKNPKSN---------------------LASLGIYVFTWNFIKEVLIEDSKDN-SSDHDFGKNIIPKILSTG-KVYAYPFEGYWQDVGTIQSYWETNLELV-RPIPPFNLHDPNWRFYTRSEEMNPAYISENGNVRNSII 295 HSP 2 Score: 28.1054 bits (61), Expect = 1.551e-19 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 3
Query: 576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DGC 707
+ EG ++KN SV+ + + + IIED ++ + ++ DGC
Sbjct: 316 IDEGAIVKN-----SVIMTKVEVGKNVIIEDAIIAENTIIKDGC 354
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_AGRT5 (Glucose-1-phosphate adenylyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.016e-19 Identity = 58/186 (31.18%), Postives = 91/186 (48.92%), Query Frame = 2
Query: 41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRV----------QAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD 559
++Q H ++ AD+T+ L + AT FG+M ++E+ II+F EKP G+ E +ASMGIYV ++ LR + DFG ++IP G V + ++ YW D+GTI+A++ AN+ +T +PD YD+S PI+T PP+K + D
Sbjct: 145 MLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNEKDEIIDFIEKPADPP-----------GIP---GNEGFALASMGIYVFHTKFLMEALRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLT-DVVPDLDIYDKSWPIWTYAEITPPAKFVHDD 315 HSP 2 Score: 23.483 bits (49), Expect = 2.016e-19 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 3
Query: 12 DHLYRMDYERLFR 50
DH+Y+MDYE + +
Sbjct: 135 DHIYKMDYEYMLQ 147
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.016e-19 Identity = 54/171 (31.58%), Postives = 93/171 (54.39%), Query Frame = 2
Query: 38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVIS-KDVMLNLLRDKF--PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPS 541
+II H A+ T+A + + + FG+M D + RI++F EKP +RA+ +AS+GIYV + K + L+RD+ +DFG ++IP + G ++ A+ ++GYW D+GT+ +++ +NL +T +PIP + YDR +TQ +PP+
Sbjct: 134 DIIDFHILKGAEGTIACIEVPPEETNRFGIMMTDLDSRIVDFEEKP-------------------QRARSN--LASLGIYVFNWKFLKEYLIRDEQNNESTHDFGHDIIPLMINEGCQIYAFKFNGYWRDVGTVRSYWESNLELT-RPIPPLNLYDRHWRFFTQTEEMPPA 282 HSP 2 Score: 24.6386 bits (52), Expect = 2.016e-19 Identity = 10/40 (25.00%), Postives = 23/40 (57.50%), Query Frame = 3
Query: 576 LGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL 695
+GE V+KN + S +C+ A+I + +++ +R++
Sbjct: 316 IGENAVVKNSVVMTSTKIGENCVITDAVIAERVIVENRVI 355 The following BLAST results are available for this feature:
BLAST of EY728837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 310
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728837 ID=EY728837; Name=EY728837; organism=Citrus sinensis; type=EST; length=901bpback to top |