EY728837

Overview
NameEY728837
Unique NameEY728837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BACCZ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=glgC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVI 577
            +++  H E +AD++++ + +    A+ FG+M  +EE  I+EF EKP+  +                       +ASMGIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I
Sbjct:  138 KMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEKPQFPRSN---------------------LASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLI 299
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BACAN (Glucose-1-phosphate adenylyltransferase OS=Bacillus anthracis GN=glgC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVI 577
            +++  H E +AD++++ + +    A+ FG+M  +EE  I+EF EKP+  +                       +ASMGIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I
Sbjct:  138 KMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEKPQFPRSN---------------------LASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLI 299
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BACAH (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=glgC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVI 577
            +++  H E +AD++++ + +    A+ FG+M  +EE  I+EF EKP+  +                       +ASMGIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I
Sbjct:  138 KMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEKPQFPRSN---------------------LASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLI 299
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_PASMU (Glucose-1-phosphate adenylyltransferase OS=Pasteurella multocida GN=glgC PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.360e-15
Identity = 50/183 (27.32%), Postives = 91/183 (49.73%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLY-----------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            +++  H  + A  TV  + ++ ++AT FG+M ++E  ++  F EKPK       K +T+              +ASMGIYV   D + ++L  +      ++DFG +++P A   G+ + A+ +           + YW D+GT+++F+ +N+ +  +  P    YD+S PI   P    PSK
Sbjct:  154 QMLLDHIHSGAKCTVGCIEVEREKATEFGVMAVNENLKVKSFVEKPKDPPAMVGKPNTS--------------LASMGIYVFDADYLYDVLEREVSSPYTSHDFGKDILPKALEEGV-LYAHPFSRSCMGRNTEGEIYWRDVGTLDSFWQSNIDLVCEN-PQLDIYDQSWPIRGNPVQTYPSK 320

HSP 2 Score: 24.6386 bits (52), Expect = 5.360e-15
Identity = 12/32 (37.50%), Postives = 21/32 (65.62%), Query Frame = 3 
Query:  585 GCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM 680
            GCVI +  I +SV+  R  I+EG+ I+  +++
Sbjct:  339 GCVITDASISYSVLFDRIKINEGSQIDHCVVL 370

HSP 3 Score: 20.4014 bits (41), Expect = 5.360e-15
Identity = 5/11 (45.45%), Postives = 9/11 (81.82%), Query Frame = 3 
Query:   12 DHLYRMDYERL 44
            DH+Y+ DY ++
Sbjct:  145 DHIYKQDYSQM 155
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BACCQ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain Q1) GN=glgC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVI 577
            +++  H E +AD++++ + +    A+ FG+M  +EE  I+EF EKP+  +                       +ASMGIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I
Sbjct:  138 KMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVEFEEKPQFPRSN---------------------LASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKARVEESLI 299
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BIFLO (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium longum GN=glgC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.954e-15
Identity = 59/205 (28.78%), Postives = 96/205 (46.83%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEE--GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA------DVTDSVI 577
            +++Q H E+ A+ TVA +    + +  FG++++D +    I  F EKP            T  GL D   +    +ASMG YV +   +   L      A+   D G ++ P   S   R +A +YD               YW D+GTI+ FY+A++ +    +P+F+ Y++  PIYT    LPP+K + A        TDS++
Sbjct:  136 QMVQQHIESGAEFTVAGIRQPIEESNQFGVIEVDPDHPNMIKNFQEKPP-----------TTTGLPDNPNQ---ILASMGNYVANTKALFEALALDEKAADTKHDMGGDIAPYFAS---RNEAGVYDFNSNEIPGSTATDHAYWRDVGTIKQFYDAHMDLIAY-VPEFNLYNQDWPIYTMSGNLPPAKFVHAGRDRLGHATDSIV 322

HSP 2 Score: 23.483 bits (49), Expect = 6.954e-15
Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 
Query:   12 DHLYRMDYERL 44
            DH+YRMD+E++
Sbjct:  127 DHVYRMDFEQM 137

HSP 3 Score: 21.9422 bits (45), Expect = 6.954e-15
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:  585 GCVIKNCKIHHSVVGLRSCISEGAIIEDTLL 677
            G ++   ++HHSV+     I   A I D++L
Sbjct:  325 GVIVSGGEVHHSVLSPNVRIHSWAQIVDSVL 355
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BIFLD (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.954e-15
Identity = 59/205 (28.78%), Postives = 96/205 (46.83%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEE--GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA------DVTDSVI 577
            +++Q H E+ A+ TVA +    + +  FG++++D +    I  F EKP            T  GL D   +    +ASMG YV +   +   L      A+   D G ++ P   S   R +A +YD               YW D+GTI+ FY+A++ +    +P+F+ Y++  PIYT    LPP+K + A        TDS++
Sbjct:  136 QMVQQHIESGAEFTVAGIRQPIEESNQFGVIEVDPDHPNMIKNFQEKPP-----------TTTGLPDNPNQ---ILASMGNYVANTKALFEALALDEKAADTKHDMGGDIAPYFAS---RNEAGVYDFNSNEIPGSTATDHAYWRDVGTIKQFYDAHMDLIAY-VPEFNLYNQDWPIYTMSGNLPPAKFVHAGRDRLGHATDSIV 322

HSP 2 Score: 23.483 bits (49), Expect = 6.954e-15
Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 
Query:   12 DHLYRMDYERL 44
            DH+YRMD+E++
Sbjct:  127 DHVYRMDFEQM 137

HSP 3 Score: 21.9422 bits (45), Expect = 6.954e-15
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:  585 GCVIKNCKIHHSVVGLRSCISEGAIIEDTLL 677
            G ++   ++HHSV+     I   A I D++L
Sbjct:  325 GVIVSGGEVHHSVLSPNVRIHSWAQIVDSVL 355
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_COREF (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium efficiens GN=glgC PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD---KFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPR-YLPPSKMLDADVTDS 571
            +++  H ++   ++VA + +    ATAFG ++ D+EG I EF EKP          D T               ASMG YV + + ++  L+D        +D G ++IP     G    A++YD              GYW D+GTI+AFY  ++ +     P F+ Y++  PI+T     LPP+K +   +  S
Sbjct:  140 QMVDEHIKSGKSVSVAGIRVPRHEATAFGCIQSDDEGNITEFLEKPADPPGTPDDPDVT--------------FASMGNYVFTTEALVRALKDDSENEDSEHDMGGDIIPYFVDRG---DAHVYDFSRNIVPGATERDKGYWRDVGTIDAFYECHMDLISVH-PIFNLYNKEWPIHTTVEGNLPPAKFVQGGIAQS 317
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BIFLI (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 8.997e-15
Identity = 60/205 (29.27%), Postives = 98/205 (47.80%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEE--GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA------DVTDSVI 577
            +++Q H E+ A+ TVA +    + +  FG++++D +    I  F EKP          +TT  GL D   +    +ASMG YV +   +   L      A+   D G ++ P   S   R +A +YD               YW D+GTI+ FY+A++ +    +P+F+ Y++  PIYT    LPP+K + A        TDS++
Sbjct:  136 QMVQQHIESGAEFTVAGIRQPIEESNQFGVIEVDHDHPNMIKNFQEKP---------ANTT--GLPDNPNQ---ILASMGNYVANTKALFEALSLDEKAADTKHDMGGDIAPYFAS---RNEAGVYDFNSNEIPGSTATDHAYWRDVGTIKQFYDAHMDLIAY-VPEFNLYNQDWPIYTMSGNLPPAKFVHAGRDRLGHATDSIV 322

HSP 2 Score: 23.483 bits (49), Expect = 8.997e-15
Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 
Query:   12 DHLYRMDYERL 44
            DH+YRMD+E++
Sbjct:  127 DHVYRMDFEQM 137

HSP 3 Score: 21.9422 bits (45), Expect = 8.997e-15
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:  585 GCVIKNCKIHHSVVGLRSCISEGAIIEDTLL 677
            G ++   ++HHSV+     I   A I D++L
Sbjct:  325 GVIVSGGEVHHSVLSPNVRIHSWAQIVDSVL 355
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_MYCMO (Glucose-1-phosphate adenylyltransferase OS=Mycoplasma mobile GN=glgC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.483e-15
Identity = 43/146 (29.45%), Postives = 76/146 (52.05%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNL---LRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 466
            +++  H+E +A++T+A + +  + A+ FG++  +E   + EF EKPK    K+ K                   ASMG+Y+ +  ++ +    L+ K     DFG  ++P       ++ AY ++GYW+D+GTI  FY ANL + K
Sbjct:  137 KMLDFHKEKNANVTIATINVSFEEASRFGILNTNENNMVEEFEEKPKIP--KSTK-------------------ASMGVYIFNYQLLKDTFEELKSKGNNFQDFGHNILPYILKKYSKIFAYEFNGYWKDVGTISTFYEANLDLIK 261

HSP 2 Score: 23.8682 bits (50), Expect = 9.483e-15
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:   12 DHLYRMDYERLFR-HTEK 62
            DH+Y+MDY ++   H EK
Sbjct:  128 DHIYKMDYSKMLDFHKEK 145
The following BLAST results are available for this feature:
BLAST of EY728837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
GLGC_BACCZ5.017e-1527.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAN5.017e-1527.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAH5.017e-1527.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_PASMU5.360e-1527.32Glucose-1-phosphate adenylyltransferase OS=Pasteur... [more]
GLGC_BACCQ6.553e-1527.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BIFLO6.954e-1528.78Glucose-1-phosphate adenylyltransferase OS=Bifidob... [more]
GLGC_BIFLD6.954e-1528.78Glucose-1-phosphate adenylyltransferase OS=Bifidob... [more]
GLGC_COREF8.558e-1528.57Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_BIFLI8.997e-1529.27Glucose-1-phosphate adenylyltransferase OS=Bifidob... [more]
GLGC_MYCMO9.483e-1529.45Glucose-1-phosphate adenylyltransferase OS=Mycopla... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728837 ID=EY728837; Name=EY728837; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGATCATTTGTACCGAATGGACTATGAGAGATTATTCAGG
CACACAGAGAAACTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGAT
GAAAAACGGGCTACTGCTTTTGGTCTGATGAAGATCGATGAAGAGGGACG
CATAATTGAATTTTCTGAGAAACCAAAAGGAGAGCAACTTAAAGCTATGA
AGGTTGATACCACCATATTAGGTCTTGATGATGAGAGAGCTAAAGAGATG
CCTTACATAGCAAGTATGGGTATTTATGTCATCAGCAAAGATGTGATGTT
AAATCTGCTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAG
TTATCCCTGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATAT
GATGGCTACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAA
TCTGGGGATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTT
CTGCTCCAATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTT
GATGCTGATGTCACTGATAGTGTAATTGGGTGAAGGCTGTGTGATTAAGA
ATTGCAAAATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAA
GGTGCAATTATCGAAGATACTTTACTTATGGGGAGCAGATTATTATGAGA
CGGATGCGGACAGGAGGTTTTTGGGCTGCAAGGGTATTGTTCCATTTGGT
ATTGGCAGAATTCTCACATCAAGAGAGCCATAATCCACANNATGCTCGAA
TGGGGGATTATGTGAAAATTCTTCACAGTGACAGTGTGCAAAAACCACCA
GGGAAACAGATGGATACTCATCAAAACCGGGATTGTTCCATAATCAGGAT
G
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