EY728837

Overview
NameEY728837
Unique NameEY728837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_ACTSZ (Glucose-1-phosphate adenylyltransferase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgC PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.254e-13
Identity = 47/188 (25.00%), Postives = 86/188 (45.74%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYDG-----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD 559
            ++I  H  + A  TV  + +  + A  FG+M ++E  ++  F EKP        K +++              +ASMGIYV + + +   L    +    ++DFG +++P A    + + A+ +D            YW D+GT+++++ +N+ +  K  P    YD++ PI   P    PSK    D
Sbjct:  146 QMILDHVNSGAKCTVGCIEVPRESAKEFGVMAVNENLKVKAFVEKPSDPPAMIGKPNSS--------------LASMGIYVFNAEYLYETLERTVNSPQTSHDFGKDIMPMALEDEV-LYAHPFDRSCMGRNTEGEIYWRDVGTLDSYWQSNIDLVSKE-PQLDIYDQTWPIRGNPVQAYPSKFFYDD 317          

HSP 2 Score: 28.1054 bits (61), Expect = 4.254e-13
Identity = 11/32 (34.38%), Postives = 22/32 (68.75%), Query Frame = 3
Query:  585 GCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM 680
            GCVI N  I +SV+     ++EG +I++++++
Sbjct:  331 GCVITNASISYSVLFDNIHVNEGTLIDESVIL 362          

HSP 3 Score: 22.3274 bits (46), Expect = 4.254e-13
Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 3
Query:   12 DHLYRMDYERL 44
            DH+Y+MDY ++
Sbjct:  137 DHIYKMDYSQM 147          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_STRAW (Glucose-1-phosphate adenylyltransferase OS=Streptomyces avermitilis GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIE-FSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLL-RDKFPG--ANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            +++  H E+ A +TVA + +    +++FG++    +G+ +E F EKP          D   L  D E        ASMG YV +  V++  L RD   G   +D G  ++P  T  G   +A LYD              GYW D+GT++A+Y+A++ +  +  P F+ ++RS PIYT    L P++
Sbjct:  137 QMLGEHIESGAGVTVAGIRVPRAESSSFGVIAPGSDGQTVENFLEKP---------ADPPGLPGDPECV-----FASMGNYVFTTKVLIEALQRDAEDGDSVHDMGGSILPALTDRG---EARLYDFSANHVPGETTRDQGYWRDVGTLDAYYDAHMDLIAER-PAFNLFNRSWPIYTHSGQLSPAR 305          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_PROAC (Glucose-1-phosphate adenylyltransferase OS=Propionibacterium acnes GN=glgC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 2
Query:   41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            ++Q H ++    TVA + +  K A+AFG++  D+  +I EF EKP               GL D   +     ASMG Y+ S++ ++  L D    A   +D G +VIP   +      A +YD               YW D+GTI+A+++A++ +     P+F+ Y+   PI+T     P +K +
Sbjct:  138 MLQYHIDSGLGCTVAGIRVPRKDASAFGIIDADQNHKITEFLEKPADPP-----------GLPDASDES---FASMGNYIFSREALVQALHDDAHSADSRHDMGGDVIPRFVN---AADAQVYDFRDNEVPGNTEKDADYWRDVGTIDAYHDAHMDLVSVE-PEFNLYNPDWPIWTMQEQAPGAKFV 306          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_HAES2 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 2336) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.767e-12
Identity = 50/182 (27.47%), Postives = 85/182 (46.70%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPG--------ATSIGMRVQAYLYDG--YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            +++  H  ++A  TV  + +  ++A+ FG+M +DE  ++  F EKPK       K DT+              +ASMGIYV   D + ++L  +      ++DFG +++P         A            DG  YW D+GT+++F+ +N+ +  +  P    YD+  PI   P    PSK
Sbjct:  150 QMLLDHVSSNAKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTS--------------LASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEH-PQLDIYDQRWPIRGNPTQTYPSK 316          

HSP 2 Score: 20.4014 bits (41), Expect = 1.767e-12
Identity = 5/11 (45.45%), Postives = 9/11 (81.82%), Query Frame = 3
Query:   12 DHLYRMDYERL 44
            DH+Y+ DY ++
Sbjct:  141 DHIYKQDYSQM 151          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_HAES1 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 129Pt) GN=glgC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.767e-12
Identity = 50/182 (27.47%), Postives = 85/182 (46.70%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GANDFGSEVIPG--------ATSIGMRVQAYLYDG--YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            +++  H  ++A  TV  + +  ++A+ FG+M +DE  ++  F EKPK       K DT+              +ASMGIYV   D + ++L  +      ++DFG +++P         A            DG  YW D+GT+++F+ +N+ +  +  P    YD+  PI   P    PSK
Sbjct:  150 QMLLDHVSSNAKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTS--------------LASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEH-PQLDIYDQRWPIRGNPTQTYPSK 316          

HSP 2 Score: 20.4014 bits (41), Expect = 1.767e-12
Identity = 5/11 (45.45%), Postives = 9/11 (81.82%), Query Frame = 3
Query:   12 DHLYRMDYERL 44
            DH+Y+ DY ++
Sbjct:  141 DHIYKQDYSQM 151          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_FRASC (Glucose-1-phosphate adenylyltransferase OS=Frankia sp. (strain CcI3) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 56/189 (29.63%), Postives = 88/189 (46.56%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIE-FSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            +++  H ++ A +TVA L +      AFG+++   +GR IE F EKP             + G  +E        ASMG YV S DV+++ LR         +D G  +IP    +  R  A +YD              GYW D+GT+++++ A + +     P F+ Y+R  PI T    LPP+K +
Sbjct:  135 QMVAQHLDSGAGVTVAGLRVPRSEGRAFGVIQTAPDGRTIEAFLEKPAD--------PPGLPGSPEET------FASMGNYVFSTDVLIDALRKDAADEDSVHDMGGNIIP--MLVAQRAAA-VYDFAGNVVPGTTVRDRGYWRDVGTVDSYFEAQMDLCALD-PVFNLYNREWPILTSIPSLPPAKFV 305          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_HAEIN (Glucose-1-phosphate adenylyltransferase OS=Haemophilus influenzae GN=glgC PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 49/182 (26.92%), Postives = 82/182 (45.05%), Query Frame = 2
Query:   41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLY-----------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            ++  H  + A  TV  + +    A  FG+M ++E  ++  F EKPK       K D +              +ASMGIYV   D +  +L  +      ++DFG +V+P     G  + A+ +           + YW D+GT+++F+ +N+ +  +  P    YD+S PI   P    PSK
Sbjct:  152 MLMDHVNSGAKCTVGCIEVPRSEAHEFGVMAVNENLKVKAFVEKPKDPPAMVGKPDVS--------------LASMGIYVFDADYLYKMLEQEVNTPQTSHDFGKDVLPKCLEEG-ALYAHPFSRSCMGRNTEGEIYWRDVGTLDSFWQSNIDLVSEN-PQLDIYDQSWPIRGNPIQAYPSK 317          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_BACCL (Glucose-1-phosphate adenylyltransferase (Fragment) OS=Bacillus caldolyticus GN=glgC PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 4.136e-11
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DKFP-GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEA 436
            +++  H    AD T++ + +  + A+ FG+M  +E   I+EF+EKP                     A     +ASMGIY+ +  ++   L+  +  P  ++DFG +VIP       R+ AY + GYW+D+GT+++
Sbjct:  136 QMLDYHIAKQADATISVIEVPWEEASRFGIMNTNENMEIVEFAEKP---------------------ANPKSNLASMGIYIFNWPLLREYLQIDNADPHSSHDFGKDVIPRLLRENKRLVAYPFKGYWKDVGTVKS 250          

HSP 2 Score: 23.0978 bits (48), Expect = 4.136e-11
Identity = 6/11 (54.55%), Postives = 11/11 (100.00%), Query Frame = 3
Query:   12 DHLYRMDYERL 44
            DH+Y+MDY+++
Sbjct:  127 DHIYKMDYQQM 137          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_STRCO (Glucose-1-phosphate adenylyltransferase OS=Streptomyces coelicolor GN=glgC PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 50/187 (26.74%), Postives = 87/187 (46.52%), Query Frame = 2
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIE-FSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            +++  H E+ A +TVA + +    + +FG++    +G+ +  F EKP               GL D+        ASMG YV +   ++  L    +     +D G  ++P  T  G   +A LYD              GYW D+GT++A+Y+A++ +  +  P F+ Y+R  P+YT    L P++
Sbjct:  130 QMLAQHIESGAGVTVAGIRVPRAESPSFGVITPGSDGQTVTGFLEKPADPP-----------GLADDPGC---VFASMGNYVFTTKALVEALHRDAEDPDSVHDMGGSILPQLTDRG---EAALYDFSANHVPGETTRDQGYWRDVGTLDAYYDAHMDLIAER-PAFNLYNRDWPVYTHSTQLSPAR 298          
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_HAEI8 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=glgC PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11
Identity = 49/183 (26.78%), Postives = 83/183 (45.36%), Query Frame = 2
Query:   41 IIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG----ANDFGSEVIPGATSIGMRVQAYLY-----------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 544
            ++  H  + A  T+  + +    A  FG+M ++E  ++  F EKPK       K D +              + SMGIYV   D +  +L D+  G    ++DFG +V+P     G  + A+ +           + YW D+GT+++F+ +N+ +  +  P    YD+S PI   P    PSK
Sbjct:  152 MLMDHVNSGAKCTIGCIEVPRSEAHEFGVMAVNENLKVKAFVEKPKDPPAMVGKPDVS--------------LTSMGIYVFDADYLYKML-DREVGTPNTSHDFGKDVLPKCLEEG-ALYAHPFSRSCMGRNTEGEIYWRDVGTLDSFWQSNIDLVSEN-PQLDIYDQSWPIRGNPVQAYPSK 317          
The following BLAST results are available for this feature:
BLAST of EY728837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
GLGC_ACTSZ4.254e-1325.00Glucose-1-phosphate adenylyltransferase OS=Actinob... [more]
GLGC_STRAW4.696e-1330.48Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_PROAC4.696e-1328.34Glucose-1-phosphate adenylyltransferase OS=Propion... [more]
GLGC_HAES21.767e-1227.47Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]
GLGC_HAES11.767e-1227.47Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]
GLGC_FRASC3.975e-1229.63Glucose-1-phosphate adenylyltransferase OS=Frankia... [more]
GLGC_HAEIN1.511e-1126.92Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]
GLGC_BACCL4.136e-1128.68Glucose-1-phosphate adenylyltransferase (Fragment)... [more]
GLGC_STRCO5.741e-1126.74Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_HAEI87.497e-1126.78Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728837 ID=EY728837; Name=EY728837; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGATCATTTGTACCGAATGGACTATGAGAGATTATTCAGG
CACACAGAGAAACTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGAT
GAAAAACGGGCTACTGCTTTTGGTCTGATGAAGATCGATGAAGAGGGACG
CATAATTGAATTTTCTGAGAAACCAAAAGGAGAGCAACTTAAAGCTATGA
AGGTTGATACCACCATATTAGGTCTTGATGATGAGAGAGCTAAAGAGATG
CCTTACATAGCAAGTATGGGTATTTATGTCATCAGCAAAGATGTGATGTT
AAATCTGCTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAG
TTATCCCTGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATAT
GATGGCTACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAA
TCTGGGGATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTT
CTGCTCCAATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTT
GATGCTGATGTCACTGATAGTGTAATTGGGTGAAGGCTGTGTGATTAAGA
ATTGCAAAATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAA
GGTGCAATTATCGAAGATACTTTACTTATGGGGAGCAGATTATTATGAGA
CGGATGCGGACAGGAGGTTTTTGGGCTGCAAGGGTATTGTTCCATTTGGT
ATTGGCAGAATTCTCACATCAAGAGAGCCATAATCCACANNATGCTCGAA
TGGGGGATTATGTGAAAATTCTTCACAGTGACAGTGTGCAAAAACCACCA
GGGAAACAGATGGATACTCATCAAAACCGGGATTGTTCCATAATCAGGAT
G
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