EY728837

Overview
NameEY728837
Unique NameEY728837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_ECO45 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.455e-20
Identity = 63/182 (34.62%), Postives = 91/182 (50.00%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  + A+AFG+M +DE  +IIEF EKP                + ++  K    +ASMGIYV   D +  LL +     N   DFG ++IP  T  G+   AY +             + YW D+GT+EA++ ANL +    +P+   YDR+ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP-----------SMPNDPGKS---LASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGL---AYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLA-SVVPELDMYDRNWPIRTYNESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.455e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_STRR6 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.694e-20
Identity = 62/184 (33.70%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVI 577
            +++Q+H++ +A +TVA L +  K A+ FG+M  D   RI+EF EKP   Q K+ K                   ASMGIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++
Sbjct:  136 DMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEKPA--QPKSTK-------------------ASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLV 297

HSP 2 Score: 24.2534 bits (51), Expect = 1.694e-20
Identity = 10/41 (24.39%), Postives = 23/41 (56.10%), Query Frame = 3 
Query:  582 EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DG 704
            +GC +    + HS++   + + EGA + D+++M   ++  G
Sbjct:  299 DGCFVDGT-VKHSILSRGAQVREGAEVLDSVIMSGAIIGQG 338

HSP 3 Score: 22.3274 bits (46), Expect = 1.694e-20
Identity = 6/13 (46.15%), Postives = 11/13 (84.62%), Query Frame = 3 
Query:   12 DHLYRMDYERLFR 50
            DH+Y+MDY+ + +
Sbjct:  127 DHIYKMDYDDMLQ 139
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_STRP2 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.694e-20
Identity = 62/184 (33.70%), Postives = 93/184 (50.54%), Query Frame = 2 
Query:   38 EIIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVI 577
            +++Q+H++ +A +TVA L +  K A+ FG+M  D   RI+EF EKP   Q K+ K                   ASMGIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++
Sbjct:  136 DMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEKPA--QPKSTK-------------------ASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLV 297

HSP 2 Score: 24.2534 bits (51), Expect = 1.694e-20
Identity = 10/41 (24.39%), Postives = 23/41 (56.10%), Query Frame = 3 
Query:  582 EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGSRLL*DG 704
            +GC +    + HS++   + + EGA + D+++M   ++  G
Sbjct:  299 DGCFVDGT-VKHSILSRGAQVREGAEVLDSVIMSGAIIGQG 338

HSP 3 Score: 22.3274 bits (46), Expect = 1.694e-20
Identity = 6/13 (46.15%), Postives = 11/13 (84.62%), Query Frame = 3 
Query:   12 DHLYRMDYERLFR 50
            DH+Y+MDY+ + +
Sbjct:  127 DHIYKMDYDDMLQ 139
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALTY (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhimurium GN=glgC PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KSLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALTI (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhi GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDENDKIIDFVEKPANP--PAMPGDAS------------KSLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALSV (Glucose-1-phosphate adenylyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KSLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALPK (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KSLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALPC (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KALASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALPB (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KALASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
[Close]
BLAST of EY728837 vs. ExPASy Swiss-Prot
Match: GLGC_SALPA (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A GN=glgC PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.892e-20
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:   53 HRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR--DK-FPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML 550
            H E  A  TVA +P+  K ATAFG+M +DE  +II+F EKP      AM  D +              +ASMGIYV   D +  LL   DK    ++DFG ++IP  T  GM   AY +             + YW D+GT+EA++ ANL +     P+   YD++ PI T    LPP+K +
Sbjct:  156 HVEKGARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANP--PAMPGDAS------------KSLASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGM---AYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLA-SVTPELDMYDQNWPIRTHMESLPPAKFV 319

HSP 2 Score: 24.2534 bits (51), Expect = 1.892e-20
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3 
Query:   12 DHLYRMDYER-LFRHTEK 62
            DH+Y+ DY R L  H EK
Sbjct:  142 DHIYKQDYSRMLIDHVEK 159
The following BLAST results are available for this feature:
BLAST of EY728837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
GLGC_ECO451.455e-2034.62Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_STRR61.694e-2033.70Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRP21.694e-2033.70Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_SALTY1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALTI1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALSV1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPK1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPC1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPB1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALPA1.892e-2036.81Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728837 ID=EY728837; Name=EY728837; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGATCATTTGTACCGAATGGACTATGAGAGATTATTCAGG
CACACAGAGAAACTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGAT
GAAAAACGGGCTACTGCTTTTGGTCTGATGAAGATCGATGAAGAGGGACG
CATAATTGAATTTTCTGAGAAACCAAAAGGAGAGCAACTTAAAGCTATGA
AGGTTGATACCACCATATTAGGTCTTGATGATGAGAGAGCTAAAGAGATG
CCTTACATAGCAAGTATGGGTATTTATGTCATCAGCAAAGATGTGATGTT
AAATCTGCTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAG
TTATCCCTGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATAT
GATGGCTACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAA
TCTGGGGATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTT
CTGCTCCAATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTT
GATGCTGATGTCACTGATAGTGTAATTGGGTGAAGGCTGTGTGATTAAGA
ATTGCAAAATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAA
GGTGCAATTATCGAAGATACTTTACTTATGGGGAGCAGATTATTATGAGA
CGGATGCGGACAGGAGGTTTTTGGGCTGCAAGGGTATTGTTCCATTTGGT
ATTGGCAGAATTCTCACATCAAGAGAGCCATAATCCACANNATGCTCGAA
TGGGGGATTATGTGAAAATTCTTCACAGTGACAGTGTGCAAAAACCACCA
GGGAAACAGATGGATACTCATCAAAACCGGGATTGTTCCATAATCAGGAT
G
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