EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_VIBHB (Anthranilate phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18
Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  212 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLG-DALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            N +I  L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ +       R+ VDE G+
Sbjct:    6 NPIITKLYEQESLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDEIGV 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18
Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  230 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG  + M + A  VE   L   +D+VGTGGDGAN  N+ST +S + AA G  VAK             D+LE  G+ ++  P  V RC+D  G+G
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18
Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE---------------GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRI---------TRPEVGGARQHKLRGTTYAPSGVVC 739
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G A  M    T +                 L   LD  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D     + RC++E G+G   A  +          R E+G      + G    P+G  C
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRKEIGIRTIFNILGPLTNPAGAGC 203          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.595e-18
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG   AM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALETKGL 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLG-DALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ +       R+ +D+ G+
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLG-DALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ +       R+ +D+ G+
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD-ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A AM   A  +E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I+  P   +R ++E GMG
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD-ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A AM   A  +E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I+  P   +R ++E GMG
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPW (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain W619) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG  + M + A  VE   L   +DIVGTGGDGAN  N+ST +S + AA G  VAK             D+LE  G+ ++  P  V RC+D  G+G
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVGRCIDSLGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD--ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            DL+  EA+ ++  +L+ A +  I  FL+ LRAKGE   EI G    M K    +        +D  GTGGDG NT+NIST A+I+ AA G  VAK             DVL+ LG+  D +P  VR+ ++E G+G
Sbjct:   13 DLSPEEAEDAVGKILSTAQDEEIGRFLLALRAKGEKPEEIAGFVRGMKKAGKTIRPKTSFRLVDTCGTGGDGLNTINISTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLDALGIKTDLEPEAVRQTIEEIGIG 147          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_VIBHB2.595e-1839.31Anthranilate phosphoribosyltransferase OS=Vibrio h... [more]
TRPD_PSEFS2.595e-1836.17Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_GEOUR2.595e-1833.33Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_BACCA2.595e-1838.64Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_VIBCH3.389e-1839.16Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_VIBC33.389e-1839.16Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_THEPX3.389e-1840.00Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP33.389e-1840.00Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_PSEPW4.427e-1837.59Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METBF4.427e-1839.26Anthranilate phosphoribosyltransferase OS=Methanos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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