EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD-ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            DLTEA+A+A++  ++  EA  A ++AFL+ LR KGET  EI G A  M + A  +       +D  GTGGDG++T NIST A+ + A  G  VAK             DVLE LG+ +D  P  V RC+DE G+G
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDEVGIG 147          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPT (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G  T M      V    DA+DIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL  LGV ID  P  V RCV+EAG+G
Sbjct:    4 FKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLPVTAPPDAVDIVGTGGDGSGSVNVSTCASFVVAGCGVTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEAGIG 149          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 70/197 (35.53%), Postives = 92/197 (46.70%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCA--RRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            F  +I  L + V L+  E+  + D +++ EA  + + A L+ LR +GET  EI G   AM      V    DA+D+VGTGGDG+ +VN+ST AS + A  G  VAK             DVL  LGV ID  P  V RC+ EAG+G   A         VG  R      T +   G +   A   R   G   R W
Sbjct:    4 FKSIIGKLATGVTLSREESAGAFDAMMSGEATPSQMGALLMALRVRGETVEEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVKIDITPAEVGRCIKEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            DL   +A+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A  V    D +DIVGTGGD +NTVNIST AS++ AA G +V K             DVLE LGV I+  P  V RCV E G+G
Sbjct:   31 DLAVDDAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIG 164          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 68/176 (38.64%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  236 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG-------SGCARRI--TRPEVGGARQHKLRGTTYAPSGV 733
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG  T M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L  LGV ID  P  + RC+ EA +G           R +  +R E+G      L G    P+GV
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGPLSNPAGV 188          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 68/176 (38.64%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  236 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG-------SGCARRI--TRPEVGGARQHKLRGTTYAPSGV 733
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG  T M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L  LGV ID  P  + RC+ EA +G           R +  +R E+G      L G    P+GV
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGPLSNPAGV 188          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNV---EGLGDA------------LDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRITRPEVGGARQHKL 703
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G A  M   AT +   +G+ D             LD+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D  P  V + + + G+G      +  P + GA +H +
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGF-----LFAPALHGAMKHAI 177          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G A +M + AT ++      +D  GTGGDGA+T NIST ++ + A CG  VAK             DVLE LGV +D  P  V + ++E G+G
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.626e-20
Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            + I  + +R DL++ +A A ++ ++N EA  A I+A L  L  KGET  EI G+A  M   +  V   G  +D  GTGGD +NT NIST A+ +AA  GA VAK             DVLE LGV I+ D  GV RC+ +AG+G
Sbjct:    5 DAIITVTNRTDLSQDDAAAVMEQMMNGEATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.123e-20
Identity = 68/185 (36.76%), Postives = 91/185 (49.19%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARR---------ITRPEVGGARQHKLRGTTYAPSGV 733
            F  L+  + +   LT  EA    D +++ EA  + + A L+ LR +GET  EI G  + M     +VE   +A+D+VGTGGD + + NIST AS + A  G  VAK             DVL  LGV ID DP G+ RC+ EAG+G   A            TR E+G      L G    P+GV
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGPLSNPAGV 188          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_SYMTH9.530e-2142.96Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_RHOPT9.530e-2141.78Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOPB9.530e-2135.53Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHOOB9.530e-2145.52Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_RHIEC9.530e-2138.64Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIE69.530e-2138.64Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_GEOSL9.530e-2138.51Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_DESAA9.530e-2138.78Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_HERA21.626e-2042.36Anthranilate phosphoribosyltransferase OS=Herpetos... [more]
TRPD_XANP22.123e-2036.76Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
back to top