EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_ROSCS (Anthranilate phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=trpD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.123e-20
Identity = 60/134 (44.78%), Postives = 75/134 (55.97%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            DLTE +A  +++ ++   A  A ++A L  L  KGET  EI G+A  M   A  V   G  LD  GTGGD A T NIST A+ +AA  GA VAK             DVLE LGV ID D  GV RC+++AG+G
Sbjct:   15 DLTEEQAAEAMEEIMTGVATPAQVAALLTALHLKGETDAEIAGMARVMRAKAIPVHFDGPLLDTCGTGGDSAGTFNISTTAAFIAAGAGATVAKHGNRAMSSVCGSADVLEGLGVTIDLDAAGVARCLEQAGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.773e-20
Identity = 59/132 (44.70%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM    T V    +A+D+VGTGGD + +VN+ST A+I+ AACG  VAK             DVL  LGV +  DP    RC+DEAG+
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGNRAATSRSGAADVLAALGVRLGLDPAAQARCLDEAGL 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_STRGG (Anthranilate phosphoribosyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L++ L+   DL+  E   ++D +++ EA +A I+ F V LRAKGET  E+ GL  AM  +A  +E  G  +DIVGTGGD A TVNIST ++I+ A  GAKV K             DVLE LGV ++  P  V    + AG+
Sbjct:   20 LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGI 161          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_NITHX (Anthranilate phosphoribosyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=trpD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20
Identity = 68/194 (35.05%), Postives = 89/194 (45.88%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCA--RRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            LI  + +   LT  EA  + D +++ EA  + +   L+ LR +GET  EI G   AM      V    DA+D+VGTGGDG+ +VN+ST AS + A  G  VAK             D L  LG+ ID  P  V RCV+EAG+G   A         VG  R      T +   G +   A   R   G   R W
Sbjct:    7 LIGKVATGATLTREEASCAFDSMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSKSGAADCLAALGIKIDLTPEQVGRCVNEAGIGFMFAPSHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGD---ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG    M   AT ++ GLG     +DIVGTGGDGA+T N+ST  S + AA G  VAK             DVLE LGV +  DP  V R V E G+G
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGNRAVSSRCGSADVLEALGVDLSLDPATVARSVQEIGIG 161          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20
Identity = 67/172 (38.95%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG-------SGCARRI--TRPEVGGARQHKLRGTTYAPSGV 733
            LT  EA  + + L++ EA  A I  FL+ LR +GET  EIVG  T M +    V    D++DIVGTGGDG  T NIST A+++ A  G  VAK             D L  LGV +D DP  + RC+ EAG+G           R +   R E+G      L G    P+GV
Sbjct:   17 LTRDEAADAFNILMSGEATPAQIGGFLIALRMRGETVPEIVGAVTVMRQKMLPVIAPTDSIDIVGTGGDGTGTYNISTLAALIVAGAGVPVAKHGNKALSSKSGAADSLTALGVKLDIDPSVIGRCISEAGVGFMFAQLHHSAMRHVGPARVELGTRTIFNLLGPLANPAGV 188          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20
Identity = 59/146 (40.41%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G  T M      V    DA+D+VGTGGDG+ +VN+ST  S + A CG  VAK             DVL  LGV ID  P  V RCV EAG+G
Sbjct:    4 FKAVIAKVATGASLTRDEAANAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLTVAAPPDAVDVVGTGGDGSGSVNVSTCTSFVVAGCGVPVAKHGNRALSSKSGAADVLNALGVKIDITPDHVGRCVAEAGIG 149          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20
Identity = 66/173 (38.15%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARR---------ITRPEVGGARQHKLRGTTYAPSGVV 736
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M      VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL  LGV ID  P  + RC+ EAG+G   A            TR E+G      L G    P+GVV
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAMKHVGPTRVELGTRTIFNLLGPLSNPAGVV 189          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD1_STRCO (Anthranilate phosphoribosyltransferase 1 OS=Streptomyces coelicolor GN=trpD1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20
Identity = 64/158 (40.51%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  170 PAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            PA  D T   +  +  L++ L+   DL+  +   +LD ++  EA +  I+ F V LR KGET  EI GL   M ++A  +E  G  +DIVGTGGDGA TVNIST ++I+ A  GAKV K             DVLE LGV ++  P  V    +EAG+
Sbjct:    6 PAGGDTTADRS--WPALLNGLLDGRDLSADDTAWALDVIMRGEATDVQIAGFAVGLRFKGETVEEISGLVRTMYEHANVIEVPGKTVDIVGTGGDGAKTVNISTMSAIVLAGTGAKVVKHGNRAASSASGASDVLEKLGVNLELTPQRVAEVAEEAGI 161          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 59/146 (40.41%), Postives = 82/146 (56.16%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            F  +I  L     L  AEA+A+ + +++ EA +A I AFL+ LR +GET  EI   AT M + A  V    +A+DIVGTGGDG  T NIST  +++ AA G  VAK             D L+ LGV +D DP  +   +++AG+G
Sbjct:    4 FKTIIARLAEGRALDAAEARAAFEIVMSGEATQAQIGAFLMGLRVRGETVAEITAGATVMRERALRVTAPANAIDIVGTGGDGVGTWNISTATALVVAAAGVPVAKHGNRKASSLSGTADALQALGVNLDIDPATIAASIEKAGIG 149          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_ROSCS2.123e-2044.78Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_METRJ2.773e-2044.70Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_STRGG3.621e-2042.25Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_NITHX4.730e-2035.05Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_DESPS4.730e-2042.66Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_AGRVS4.730e-2038.95Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_RHOP26.177e-2040.41Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHILO6.177e-2038.15Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD1_STRCO6.177e-2040.51Anthranilate phosphoribosyltransferase 1 OS=Strept... [more]
TRPD_PARL18.067e-2040.41Anthranilate phosphoribosyltransferase OS=Parvibac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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