EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CORGL (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum GN=trpD PE=3 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 2
Query:  287 LNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATN--VEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWD 601
            + E D+  I+A L  +R +GE F +I G A A +  A    + G G  LD  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLE L + +  D
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLD 138          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CORGB (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum (strain R) GN=trpD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 2
Query:  287 LNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATN--VEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWD 601
            + E D+  I+A L  +R +GE F +I G A A +  A    + G G  LD  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLE L + +  D
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLD 138          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_SERP5 (Anthranilate phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL----------DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            +++ L     + + E+Q     ++  E + + ++A L+ ++ +GE   EI G A A+         L DAL          DIVGTGGDG N++NIST ++ +AAACGAKVAK             D+L   G+ +D      R+ +DE G+
Sbjct:    4 ILEKLYRSESMNQQESQQLFSAIVRGELEPSQLAAALISMKIRGEHPEEIAGAAKAL---------LADALPFPRPDYPFADIVGTGGDGTNSINISTASAFVAAACGAKVAKHGNRSVSSRSGSSDLLAAFGIRLDLPAEEARKALDELGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PROA2 (Anthranilate phosphoribosyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  212 NELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDP 604
            N L+  L++  DL+ AE +A +  ++     +  I+A L LL+ KG    E+ G   AM+ +A  +E    A+D  GTGGD A T N+ST A+I+A   G  +AK             DVLE LG  ID  P
Sbjct:    4 NALLQQLLADNDLSSAEMEACITAIMTGGFSDIAIAAILALLQKKGVKATELSGAYRAMMTHAIPIELDEHAVDTCGTGGDHAGTFNVSTVAAIIANGAGVSIAKHGNRSVTSRCGSADVLEALGYTIDLSP 135          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METTM (Anthranilate phosphoribosyltransferase OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIV---GTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            F  +++ ++   +L+E EA   ++ +++ E  +  I+A L  L  KGET  EI G A AM + A  V+ + +++ +V   GTGGD   + N+ST A+I+AAA G KVAK             D+LE  GV I+  P    R ++  G+
Sbjct:    3 FEGIMNDIMDFRNLSEDEAHDLMEMIMDGEMGDVQIAALLTALAMKGETVDEITGFARAMRERAVKVK-IPESMRVVDACGTGGDRFKSYNVSTAAAIIAAAAGVKVAKHGNRAVTGSCGGADILEAAGVNIELGPEAACRSLETLGI 149          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BLOPB (Anthranilate phosphoribosyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 44/144 (30.56%), Postives = 80/144 (55.56%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLNEADEAL-ISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            +++D L    ++ + +++A L  ++ E   A+ I++ L+ ++ +GETF EI+G    ++ +A           DI GTGGD +NT+NIST ++I+AA CGAK+ K             D+L+   ++++  P   R+  DE G+
Sbjct:    3 KILDTLYQGKNINQKQSEALLHSIIKEKLSAIQIASALISMKIRGETFEEIIGAVNILLTHAKPFPRPNSLFADITGTGGDNSNTINISTTSAIVAATCGAKIIKHGNRSISSLTGSMDLLKQHCLILN-SPQQARKNFDELGI 145          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPS (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPP (Anthranilate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPN (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPE (Anthranilate phosphoribosyltransferase OS=Yersinia pestis GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    5 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 147          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_CORGL2.514e-1341.12Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CORGB2.514e-1341.12Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_SERP53.283e-1332.24Anthranilate phosphoribosyltransferase OS=Serratia... [more]
TRPD_PROA23.283e-1336.36Anthranilate phosphoribosyltransferase OS=Prosthec... [more]
TRPD_METTM3.283e-1333.78Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_BLOPB3.283e-1330.56Anthranilate phosphoribosyltransferase OS=Blochman... [more]
TRPD_YERPS4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPP4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPN4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPE4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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