EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPB (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERPA (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_YERP3 (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A A++  A +     D L  DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L   G+ +D      R  +D+ G+
Sbjct:    5 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPR-PDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGV 147          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_FRATM (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGL-GDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++D L +  DL+  E+    DY +  + +    ++ L  L+ K ET  EI     A+         + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+  P   ++C++   +G
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPSQTSILTALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_FLAJ1 (Anthranilate phosphoribosyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            +++ LI+   L++ EA+  L  + + + + + ISAFL +   +  T  E+ G   A+++    ++    + +D+ GTGGDG +T NIST AS +AA  G KVAK             +V+E +G+    DP  + +C+D+AG+
Sbjct:    4 ILNKLINHEVLSKEEAKNVLINISSGQYNPSQISAFLTVFMMRSITIDELSGFREALLELCIRIDLSAYNTIDLCGTGGDGKDTFNISTLASFVAAGAGIKVAKHGNYGVSSISGSSNVMEKMGIKFSNDPSFLEKCIDQAGI 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CORDI (Anthranilate phosphoribosyltransferase OS=Corynebacterium diphtheriae GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  212 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDP 604
            N LI  L +     E   +      + + D+  I+A L  +R +GET+ +I G A A +         G  L D  GTGGDGANT+N++T AS++AAA G K+ K             DVLE L + +D +P
Sbjct:    8 NNLIAYLDNPHPTVEQAIEVFTPLTVGDYDDVHIAALLATIRTRGETYADIAGAAKAFLAAGRPFPITGAGLMDSAGTGGDGANTINVTTAASLVAAAGGVKMVKCGNRSVSSKSGSADVLEALNIPLDLNP 139          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_UNCTG (Anthranilate phosphoribosyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=trpD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 52/143 (36.36%), Postives = 73/143 (51.05%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            E I  +++R +LT  + +  ++ +++  A +A I++FL  LR KGET  EI   A  M +    +    D LDIVGTGGD   T NIST +S + AA G  VAK             D+LE LGV I   P      + + GM
Sbjct:    4 EAIYEIVNRNNLTIDKTKEVMNRIMDGGATDAQIASFLTSLRLKGETIEEITACAMVMREKCQKLNPEFDVLDIVGTGGDELATFNISTISSFIIAAAGVPVAKHGNRSVSSKCGSADLLEVLGVNIMLTPQQCEAILKKVGM 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_NITEC (Anthranilate phosphoribosyltransferase OS=Nitrosomonas eutropha (strain C91) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  305 ALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIV---GTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            A+ +A +  LR K E+ GEI   A  M + A ++E + D++++V   GTGGDG NT NIST ++ +AAA  A+VAK             DVLE +G+ ++  P  + + + E G+G
Sbjct:   36 AMTAALMTGLRMKRESIGEITAAAQVMRELALHIE-VADSVNLVDTCGTGGDGCNTFNISTASAFVAAAADAQVAKHGGRSVSSKAGSADVLEAIGIHLNQTPDQIAQSITEVGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_DICT6 (Anthranilate phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 2
Query:  293 EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E  EA + A L+ LR KGE   EI G    + + A  +     A+D+ GTGGD +NT NIST  +   A+ G +VAK             DV+E LG     +P  + R +DE G+G
Sbjct:   31 EITEAQLGAVLLGLRLKGENPEEIAGFVDVLHEKAKKIPNRTPAVDVCGTGGDKSNTFNISTAVAFTLASLGVRVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIARDIDEKGIG 147          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLPD (Anthranilate phosphoribosyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAG 637
            +L++ L++  DL   E    ++ +++ A  + +++A L LL+ KG T  E  G   +++  AT  +   DA+D  GTGGD   T NIST A+I+A   G  +AK             DVLE LG  ID  P        + G
Sbjct:    5 KLLNMLMAGKDLAREEMTLCMNNIMDGAFSDIVLAALLALLQKKGVTADEAAGAYASIMARATLCKLDEDAVDTCGTGGDNTGTFNISTAAAIIACGAGVSIAKHGNRSMTSQCGSADVLEALGFAIDLPPSATEELFRQTG 146          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_YERPB4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPA4.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERP34.288e-1332.64Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_FRATM4.288e-1334.03Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_FLAJ14.288e-1331.47Anthranilate phosphoribosyltransferase OS=Flavobac... [more]
TRPD_CORDI4.288e-1334.85Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_UNCTG5.600e-1336.36Anthranilate phosphoribosyltransferase OS=Uncultur... [more]
TRPD_NITEC5.600e-1337.07Anthranilate phosphoribosyltransferase OS=Nitrosom... [more]
TRPD_DICT65.600e-1336.75Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_CHLPD5.600e-1332.39Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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