EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD1_ANASP (Anthranilate phosphoribosyltransferase 1 OS=Anabaena sp. (strain PCC 7120) GN=trpD1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 55/169 (32.54%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  158 QTPQPAVSDNTRPLTPCFNE---LIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD----ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            QTP   +S     +TP  N+   ++  L+ R  LT A+A   +  +L +     L  A L  ++AKG +  E+VG+A  +   ++            +D  GTGGDGA+T NIST  + +AAA G KVAK             DVLE LG+ ++ +   V+  V E G+
Sbjct:    6 QTPLDNIS-----VTPDSNDWSAILQQLLKRQSLTVAQATDLMQGWLTDTIPPVLSGAILAAIQAKGVSSEELVGMARVLQSQSSYSPPHSPFPTPLIDTCGTGGDGASTFNISTAVAFVAAAAGVKVAKHGNRSASSKTGSADVLEALGINLNANADKVQAAVSEVGI 169          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PROMH (Anthranilate phosphoribosyltransferase OS=Proteus mirabilis (strain HI4320) GN=trpD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L +   L+  E+Q     ++  E  E+ ++A L+ ++ +GE   EI G A A++  A+      D L  DIVGTGGDGAN++NIST ++ +AA  G KVAK             D+L   G+ +D   +  R+ +DE G+
Sbjct:    8 LFAGQQLSLEESQTLFSAIIRGELTESQLAAVLISMKMRGEHPQEIAGAARALLDNASPFPR-PDYLFCDIVGTGGDGANSINISTASAFVAAEIGLKVAKHGNRSVSSRSGSSDLLAAFGIPLDKSANDARQLLDEIGL 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_LISW6 (Anthranilate phosphoribosyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=trpD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 49/146 (33.56%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  221 IDCLISRVDLTEAEAQASLDYLLNEADEALIS-----AFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            ++ L+ +V   E   +A ++ L  E  E  +S     AFL+ L+ KGET  E+ G+A AM + A  V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I+  P  +   +++ G+
Sbjct:    1 MESLLQKVYDQENLTKAEMNILATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAEAMQEVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGI 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_DESVM (Anthranilate phosphoribosyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=trpD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGL-GDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCV 625
            +++ L + +DL    A+A    L++ E   A   +FL+ LR KGET  E+     A +  A  V G+ G  +DIVGTGGDG ++ N ST  ++  A  G +V K             D +E LG+ ++ DP  VR  V
Sbjct:    8 ILETLATGMDLAPELAEAGFSRLMDGEMTCAQAGSFLMGLRMKGETPQELTEAVRAALARAVRVTGIDGPTIDIVGTGGDGRSSFNCSTATALTLAGMGHRVVKHGNRAVSSSCGAADAVEGLGLPLELDPEDVRALV 145          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPG_THEMA (Anthranilate synthase component II OS=Thermotoga maritima GN=trpGD PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD-ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAG 637
            L+   DLT  E++  ++++++  A +A I+ FLV LR K ET  E+ G+A+ M + + +++      +D  GTGGDG  T NIST  + + AA G  VAK             DVLE  G  ++  P  + R + E G
Sbjct:  257 LVEFEDLTFEESRQVMNFIMSGNATDAQIAGFLVALRMKEETGDELGGMASVMREKSIHIKAPSPRTVDTCGTGGDGFGTFNISTTTAFVVAAAGIPVAKHGNRSVSSKVGSADVLEAGGYKLEKTPEEMERELKETG 394          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_LISIN (Anthranilate phosphoribosyltransferase OS=Listeria innocua GN=trpD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            L+  +  + +L++AE    + +       +  I+AFL+ L+ KGET  E+ G+A AM + A  V+   G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I+  P  +   +++ G+
Sbjct:    4 LLQKVYDQKNLSKAEMNIVATEIFEGRLSKTKIAAFLMALKVKGETAEEMAGIAEAMQQVAIQVDFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGI 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_LACLA (Anthranilate phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=trpD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 2
Query:  212 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            NEL   +  R D+TE E     + ++  E  E  I++FLV L+ KGE   E+ GLA A+ K A  +   L +A+D  GTGGD + + NIST A+ + AA G  +AK             DVLE LG+ +      + +  D+ G+
Sbjct:    3 NELEKVMSGR-DMTENEMNMLANSIIQGELSEVQIASFLVALKMKGEAASELTGLARALQKAAIPIPTNLTNAMDNCGTGGDRSFSFNISTTAAFVLAAGGVNMAKHGNRSITSKSGSADVLEALGINLYLPAEKLAQVFDKVGL 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLP8 (Anthranilate phosphoribosyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=trpD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVID 595
            ELI  L++  DL+  E +A +D ++ N   +A   A L LL+ KG T  E +G    ++   T +     A+D  GTGGD   T NIST A+ +AA  G  +AK             DVLE LG  +D
Sbjct:    5 ELIQKLLAGADLSAQEMEACIDSIMENRFTDAGTGAILALLQKKGVTPTEAIGAYENLMTRVTPITLPAHAVDTCGTGGDHRGTFNISTAAAFIAAGAGVPIAKHGNRSITSKCGSADVLEALGYRVD 132          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BACHD (Anthranilate phosphoribosyltransferase OS=Bacillus halodurans GN=trpD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 43/121 (35.54%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDP 604
            L E +A+  +D ++  EA  + I++ L +LR +GET  E+ G A AM +++  +E      +D  GTGGD   T NIST  ++L +A G  VAK             DVLE L + I   P
Sbjct:   15 LAERKAEQVMDAIMKGEATASQIASLLTVLRFRGETVAEMTGFARAMRRHSIQIEHSFSQVVDTCGTGGDDVGTFNISTATALLVSALGVPVAKHGNRAVSSKSGSADVLEALQIPIQSSP 135          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PYRIL (Anthranilate phosphoribosyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=trpD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  272 SLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAG 637
            S + L    ++  ++A L  +R +GET  E+ G   +  + A  V    +A+D  GTGGDGA T+N+ST A+++AAA GA+V K             D +E +G  ++  P      V++ G
Sbjct:   23 SREILSGGLNDVAVAAALTAMRCRGETAEEVTGFVKSAREVAVKVPLRVEAIDTAGTGGDGAGTINLSTLAAVVAAAAGARVLKHGNRSASGFFGSADFMEAVGYNLEVGPEKAAEMVEKIG 144          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD1_ANASP2.779e-1232.54Anthranilate phosphoribosyltransferase 1 OS=Anabae... [more]
TRPD_PROMH3.630e-1234.29Anthranilate phosphoribosyltransferase OS=Proteus ... [more]
TRPD_LISW63.630e-1233.56Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_DESVM3.630e-1234.06Anthranilate phosphoribosyltransferase OS=Desulfov... [more]
TRPG_THEMA4.741e-1234.06Anthranilate synthase component II OS=Thermotoga m... [more]
TRPD_LISIN4.741e-1232.17Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_LACLA4.741e-1235.17Anthranilate phosphoribosyltransferase OS=Lactococ... [more]
TRPD_CHLP84.741e-1235.94Anthranilate phosphoribosyltransferase OS=Chloroba... [more]
TRPD_BACHD4.741e-1235.54Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_PYRIL6.191e-1231.97Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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