EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11
Identity = 58/172 (33.72%), Postives = 77/172 (44.77%), Query Frame = 2
Query:  248 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRI---------TRPEVGGARQHKLRGTTYAPSG 730
            L E EA   +  L+  E      +  LV L  +GE   EI  +A AM + A  +       LDIVGTGGDG   +N+ST A+++AAA G  VAK             D+LE LGV ++  P  V   ++E G G   AR            R E+G      L G    P+G
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAG 184          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11
Identity = 58/172 (33.72%), Postives = 77/172 (44.77%), Query Frame = 2
Query:  248 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRI---------TRPEVGGARQHKLRGTTYAPSG 730
            L E EA   +  L+  E      +  LV L  +GE   EI  +A AM + A  +       LDIVGTGGDG   +N+ST A+++AAA G  VAK             D+LE LGV ++  P  V   ++E G G   AR            R E+G      L G    P+G
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAG 184          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLL2 (Anthranilate phosphoribosyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=trpD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVID 595
            L+S    ++ E    ++ ++N    + +I+A L LL  KG T  E+ G   ++I  A  ++   DA+D  GTGGD A T NIST  SI+A + G  +AK             DVLE LG  ID
Sbjct:   10 LLSGDHFSQEEMTQCMNAIMNGVFPDTVIAALLALLEHKGVTSTEVAGAYYSLIAKANTIDLSPDAVDTCGTGGDHAGTYNISTIGSIIANSTGVSIAKHGNRSVTSSCGSADVLEELGFRID 132          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PARDP (Anthranilate phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=trpD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 56/184 (30.43%), Postives = 74/184 (40.22%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCA--RRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            LT  EA+A+   L    A  A I   L+ +R +GET  E+     AM      ++    A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  LG+ +   P      +   G+    A         VG AR      T +   G +    L  R   G  DR W
Sbjct:   19 LTGTEAEAAFGALFEGAATPAQIGGLLMAMRVRGETVEEMAAATRAMRARMNRIKAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGSADALTHLGLNVMSTPEIAEAALAATGICFMMAPVHHPAMRHVGPARAELGTRTIFNLLGPMTNPGLVKRQLTGTFDRVW 202          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_SULAC (Anthranilate phosphoribosyltransferase OS=Sulfolobus acidocaldarius GN=trpD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDE 631
            DL+  +++A  + L+  E  E  +SA L  L  KGE+F EIVG A AM   A  +    +ALD  GTGGDG  T+N+ST  +I+ +     VAK             DVLE LG  I+  P    + + E
Sbjct:   10 DLSTEDSEAIANALMKGEIPEIQVSALLTSLAMKGESFEEIVGFARAMRNNAIKIS-YPEALDTAGTGGDGLGTINVSTITAIILSQL-FPVAKHGNRSVSGKSGSADVLEALGYNINIAPELANKLIKE 137          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_STRSV (Anthranilate phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=trpD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 48/144 (33.33%), Postives = 73/144 (50.69%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEG-LGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            E+I  L    DL+ AE    ++ ++     E+ I AFL+ L+ KGET  E   LA  M  +A  +   +  A+D  GTGGD + + NIST A+ + A  G K+AK             DVLE LG+ +D D   + +  ++ G+
Sbjct:    3 EIIAKLADFKDLSSAEMTDVIERIVTGRVTESQIVAFLLGLKMKGETIEERTALAQVMRGHAKQIPTTIRTAMDNCGTGGDKSFSFNISTTAAFVLAGGGIKMAKHGNRSISSKSGSADVLEALGINLDLDAASLGKVFEQTGI 146          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_THET84.013e-1133.72Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET24.013e-1133.72Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_CHLL25.241e-1135.77Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_PARDP6.845e-1130.43Anthranilate phosphoribosyltransferase OS=Paracocc... [more]
TRPD_SULAC8.940e-1136.92Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_STRSV8.940e-1133.33Anthranilate phosphoribosyltransferase OS=Streptoc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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