EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++  L    DL+ A+   +++ ++++ A  A I+AF V ++ KG T  E+ GLAT M ++A  V   GDA+DIVGTGGD + +VNIST +SI+ AA G  V K             DVLE LGV ++  P  V RCV E G+G
Sbjct:    1 MLGALADGRDLSAADTAWAMNEIMSDNATSAQIAAFGVAIKIKGPTPEELGGLATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVREVGIG 143          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 67/194 (34.54%), Postives = 92/194 (47.42%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG--SGCARRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            LI  + +   LT  EA A+ + +++ EA  + +   L+ LR +GET  EI G  +AM      V+   DA+D+VGTGGDG+ +VN+ST AS + A  G  VAK             D L  LG+ ID  P  V RC++EAG+G     A       VG  R      T +   G +   A   R   G   R W
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGNRALSSRSGAADCLAALGIRIDLTPEQVGRCINEAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVRRQMVGVFSRQW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD--ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  L    DL+  EA+A+L+ +L+ A++  I  FL+ L+AKGE   EIVG    M K    ++       +D  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLE LG+ +D  P  VR+ +++ G+G
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEKIGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 2
Query:  236 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARR---------ITRPEVGGARQHKLRGTTYAPSGV 733
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      VE    A+DIVGTGGDGA T NIST A+++ A  G  VAK             D L  LGV +D  P  + RC+ EAG+G   A++          TR E+G      L G    P+GV
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPDGAIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLDIGPAVISRCIAEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLANPAGV 188          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSE14 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +++++DLT  E +  + + +  +  EA I AFL+ +R K ET  EIVG  + M + A++VE   L   +DIVGTGGDGAN  N+ST ++ + AA G KVAK             D+LE  GV ++  P  V RC+D  G+G
Sbjct:   10 VVNQLDLTTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELASSVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCKVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGD--ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  L    DL+  EA+A++  +L+ A++  I AFL+ LRAKGE   EI G    M +    ++ +     +D  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLE LG+ +D  P  VR+ +++ G+G
Sbjct:    6 EYIKKLEEGSDLSSEEAEAAIGEILSTAEDEEIGAFLLALRAKGEKPQEIAGFVRGMKQAGNTIKPVTPFRVIDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLEALGIKVDLTPGQVRKTIEKIGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 64/169 (37.87%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  245 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDI---------------VGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRITRPEVGGARQHKL 703
            DL+E E    ++ +++ E   A I +F+  LR KGET  EI G A  M + AT +    + LDI               VGTGGDG NT NIST  S + +ACG KVAK             DVLE LGV +D  P  V RC++E G+G      +  P + GA +H +
Sbjct:   14 DLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGF-----LFAPALHGAMKHAI 177          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 71/188 (37.77%), Postives = 96/188 (51.06%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYA----TNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRI---------TRPEVGGARQHKLRGTTYAPSGVV 736
            E+++ L+   +L  +EA A+++ L+  +  EA ++AFLV L+ KGET  EI   A A+ + A    T  EGL   +D  GTGGDG  T NIST A+ + A  G  VAK             DVLE LGV ID D  G  RCVDE G+G   A  +         TR E+G      + G    P+ +V
Sbjct:    4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGETEEEISAFALALREKARRVITQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGPLANPANIV 188          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PHOPR (Anthranilate phosphoribosyltransferase OS=Photobacterium profundum GN=trpD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.376e-19
Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLG-DALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            E+ D L ++  LT+ E+    D ++  + D  L+SA L  L+ KGET  EI G A+A++  A        D  DIVGTGGDGANT+NIST A+ +AAACG KVAK             D+L+  G+ +   P   R  +DE G+
Sbjct:   10 EIADKLYAQQALTQDESHVLFDAIIKGDVDPILLSAVLTALKIKGETPAEIAGAASALLANANAFPSPEYDFADIVGTGGDGANTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLDKFGINLAMTPENARGALDELGV 153          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE-GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRITRPEVGGARQH 697
            + I  +  R+DL+E E  A +  ++N EA  A +  FLV L  KGET  E+   A  M   AT VE   G  +D  GTGGD + + NIST ++++ AA G +VAK             DVLE  GV +D  P  V RC+++ G+G      +  P+  GA +H
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDEVTAAARVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGF-----LFAPKHHGAMKH 162          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_NOCFA8.067e-2041.26Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD_NITWN8.067e-2034.54Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_METMA8.067e-2039.31Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_RHIME1.054e-1937.50Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSE141.054e-1939.72Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METAC1.054e-1938.62Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_GEOLS1.054e-1937.87Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_CARHZ1.054e-1937.77Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_PHOPR1.376e-1940.28Anthranilate phosphoribosyltransferase OS=Photobac... [more]
TRPD_THISH2.347e-1936.81Anthranilate phosphoribosyltransferase OS=Thioalka... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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