EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   +D+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LE  G+ ++     V RC+D  G+G
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_OLICO (Anthranilate phosphoribosyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 69/204 (33.82%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCA-------RRI--TRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            F  ++  L     L+  EA A+ D+L++ EA  + I   L+ +R +GET  EI G  + M      V    DA+D+VGTGGDG+ +VN+ST A+ + A  G  VAK             DVL +LGV I+  P  V  C+ +AG+G   A       R +  TR E+G      L G    P+GV        R   G   +HW
Sbjct:    4 FKAILAKLADGKSLSRDEAVAAFDHLMSGEATPSQIGGALMAMRVRGETVDEITGAVSTMRAKMLRVTAPDDAVDVVGTGGDGSGSVNVSTCAAFIVAGAGVPVAKHGNRAMSSKSGAADVLASLGVNIELTPEQVGACIAKAGIGFMFAPAHHPAIRHVGPTRKELGTRTIFNLLGPLSNPAGV-------KRQMIGVFAKHW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 65/184 (35.33%), Postives = 88/184 (47.83%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG--SGCARRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G  + M      V+   +A+DIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL  LGV ID  P  V RC+ EAG+G     A       VG  R      T +   G +   A   R   G   R W
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFSRQW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_AGRT5 (Anthranilate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 56/133 (42.11%), Postives = 73/133 (54.89%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            L   +A+ + D L++ EA  + I  FL+ LR +GET  EIVG  ++M      V    +A+DIVGTGGDG  T NIST ASI+ A  G  VAK             D L  LGV +D  P  + RC+ EAG+G
Sbjct:   17 LNREDARTAFDILMSGEATPSQIGGFLMALRVRGETVDEIVGAVSSMRARMLPVSAPANAIDIVGTGGDGIGTYNISTLASIITAGTGLPVAKHGNRALSSKSGTADALSALGVRLDIGPDLIARCIAEAGLG 149          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RUBXD (Anthranilate phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCAR 658
            L+E EA+ +L+ ++   A     +A L  LR +GE+  EIVG A AM ++A  V      +D  GTGGD   T+N+ST A+ +A   G  +AK             DVLE LG  I+  P  V RC++EAG+G   AR
Sbjct:   15 LSEGEAERALETIMEGGASPEATAALLTALRVRGESVQEIVGFARAMRRFAARVRAPEGVVDTCGTGGDAKGTINVSTAAAFVARGAGVVIAKHGNRAATSRAGSADVLEALGAAIELSPEQVSRCIEEAGIGFMFAR 152          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG  + M + A  VE   L   +DIVGTGGDGAN  N+ST +S + AA G  VAK             D+LE  G+ ++  P  V RC+D  G+G
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG  + M + A  VE   L   +DIVGTGGDGAN  N+ST +S + AA G  VAK             D+LE  G+ ++  P  V RC+D  G+G
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA6 (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 2
Query:  293 EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLG-DALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            + D  ++S+ L  L+ KGET  EI G ATAMI+ A+ V+    D  DIVGTGGDG NT+NIS+ A+I+AA+CG KVAK             D+    G+ +D  P   R C+D+A +
Sbjct:   31 QVDNIILSSLLTALKIKGETPEEIAGAATAMIQNASPVKRPEYDFADIVGTGGDGHNTINISSAAAIVAASCGVKVAKHGNRSVSSKSGSADLFNAFGMKLDMSPAAARECLDKANL 147          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 66/184 (35.87%), Postives = 88/184 (47.83%), Query Frame = 2
Query:  221 IDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDA-LDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG-------SGCARRITRP--EVGGARQHKLRGTTYAPSGVVC 739
            I  +++   L+EAEA  ++D ++  EA  A I+AFL  LR KGE   EI G A +M + A  +       +D  GTGGDG  T NIST A+ + A  G  VAK             D+LE LG+ +D  P  V RC+DE GM         G  +    P  E+G      L G    P+G  C
Sbjct:    6 ISKVVAGQHLSEAEAAEAMDIIMAGEATPAQIAAFLTALRLKGEMVDEITGFARSMRRRAIPLTTSHPVFVDTCGTGGDGRQTFNISTTAAFVVAGAGVAVAKHGNRSVSSRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFLFAPVFHGAMKYAAGPRREIGIRTAFNLLGPLTNPAGAPC 189          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 64/153 (41.83%), Postives = 83/153 (54.25%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNV----EGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARR 661
            L+  L+   +L  A+ A A  + +   A  A I+ F V LRAKGET  E+ GL  AM+ +A  V    E    A+D+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +D  P  V  CV EAG+G   A R
Sbjct:    9 LLAALLRGDELCTADTAWAMGEIMSGSAGPAQIAGFAVALRAKGETPTELAGLVEAMLTHAVPVNLPAELRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEAVATCVAEAGIGFCFAAR 161          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_PSEA75.229e-1938.30Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_OLICO5.229e-1933.82Anthranilate phosphoribosyltransferase OS=Oligotro... [more]
TRPD_BRASO5.229e-1935.33Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_AGRT55.229e-1942.11Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_RUBXD6.830e-1938.41Anthranilate phosphoribosyltransferase OS=Rubrobac... [more]
TRPD_PSEPK6.830e-1938.30Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEP16.830e-1938.30Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA66.830e-1943.59Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]
TRPD_MOOTA6.830e-1935.87Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_SALTO8.920e-1941.83Anthranilate phosphoribosyltransferase OS=Salinisp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
back to top