EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEMY (Anthranilate phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 61/165 (36.97%), Postives = 87/165 (52.73%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRITRPEVGGARQHKL 703
            E ++ +++++DLT  E QA + + +  +  +A I AFL+ +R K ET  EIVG A+ M + A  V    + L D  GTGGDG N  N+ST A+ + AA G KVAK             D+LE  GV +   P  V RCV+  G+G   A     P   GA +H +
Sbjct:    5 EALNRIVAQLDLTTEEMQAVMREIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAASVMRELAAPVVIDAERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVYLGLKPEQVARCVESVGVGFMFA-----PSHHGAMKHAI 164          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 63/164 (38.41%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  164 PQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNV--EGLGD-ALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            P+PA        TP +  ++  L +   L   +   ++D ++   A  A I+AF V ++ K  T  E+  LA  M+K+A  V  + +G   +DIVGTGGDGANTVN+ST ASI+ AA G  V K             D LE LG+ ID  P  V RCV E G+G
Sbjct:    6 PRPAAPTTDPGDTPTWAMILGRLTTGQSLLPGQTAWAMDQIMTGVATPAQIAAFAVSMKMKRPTSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIG 169          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METBU (Anthranilate phosphoribosyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDAL--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            LI   DL+  E++A++  +L  A +A + AF++ ++ KGET  E+ G A  M+  A  +    D +  D  GTGGD  NT+NIST A+I+AAA G  VAK             DV + LGV ID +P  V+  +++ G+G
Sbjct:    8 LIDGHDLSMVESEAAMGQILESATDAQVGAFVMGMKMKGETSDEVAGFAKGMLNVANMIRPKVDGILVDTCGTGGDRHNTINISTAAAIVAAAAGVTVAKHGNHSFTSLSGSADVFKELGVKIDLEPDLVKSSIEDIGIG 147          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 2
Query:  200 TPCFNELIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            T  ++ ++  L++R DL+ A+A  A    +  EA +A I+AFL+ LRAKGET  EIVG   A++ +A  +     ALDIVGTGGD   TVNIST A+I+AA  G  V K             DVL  LG+ +   P  V   +   G+
Sbjct:    4 TQSWSSVLIALLAREDLSVADASWAMRQVMTGEATDAQIAAFLIALRAKGETVDEIVGFRDAVLDHAVGLPVNSMALDIVGTGGDRFGTVNISTTAAIVAAGAGVPVIKHGNRAASSSSGSSDVLAALGIDLTLPPERVAEVLRATGI 151          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            L+  EA ++ D +++ EA  + + A L+ LR +GET  EI G  + M      V+    A+DIVGTGGDG+ +VN+ST A+ + A  G  VAK             DVL  LGV ID  P  V RCV EAG+G
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIG 149          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 67/194 (34.54%), Postives = 90/194 (46.39%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG--SGCARRITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V    DA+DIVGTGGDG+ +VN+ST AS + +  G  VAK             DVL +LGV ID  P  V RCV E G+G     A       VG  R      T +   G +   A   R   G   R W
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMVGVFSRQW 200          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 64/171 (37.43%), Postives = 85/171 (49.71%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARR---------ITRPEVGGARQHKLRGTTYAPSG 730
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   A  M   A  ++    A+DIVGTGGD A T NIST A+++ AACG  VAK             DVL  LGV +D D   V R + E G+G   A+R           R E+G      L G    P+G
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAEVGIGFMFAQRHHSAMKHVAPARSELGTRTIFNLLGPLANPAG 194          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  230 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG  + M + A  VE   L   +DIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LE  GV ++  P  V RC+D  G+G
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIG 154          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:  230 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVE--GLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG  + M + A  VE   L   +DIVGTGGDGAN  N+ST +S + AA G  VAK             D+LE  G+ ++  P  V RC+D  G+G
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIG 150          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_METNO (Anthranilate phosphoribosyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 2
Query:  248 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGM 640
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +    V     A+DIVGTGGD + + N+ST A+I+ A+CG  VAK             DVL  LGV +  DP  + +C+ +AG+
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAADEIVGAAGALRERMVRVAAPPGAIDIVGTGGDHSGSYNVSTLAAIITASCGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEALAQCLAQAGL 148          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_PSEMY8.920e-1936.97Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MYCGI8.920e-1938.41Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_METBU8.920e-1937.86Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_LEIXX8.920e-1939.86Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_BRASB8.920e-1941.35Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_BRAJA8.920e-1934.54Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_RHORT1.165e-1837.43Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_PSEU21.165e-1839.01Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPU1.165e-1838.30Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METNO1.165e-1840.91Anthranilate phosphoribosyltransferase OS=Methylob... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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