EY728832

Overview
NameEY728832
Unique NameEY728832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.362e-35
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF  S  +  T+E+Y RC Y    +N++  + TQ+  +E  KLK K+E+L    R   G   G +
Sbjct:    1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEM 118          

HSP 2 Score: 31.9574 bits (71), Expect = 3.362e-35
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+ LERQL ++L   R  K +  ++++ +L+ KE  L
Sbjct:  121 KELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQL 159          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 3.363e-35
Identity = 71/123 (57.72%), Postives = 89/123 (72.36%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRGKV+LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS++GKLYE+ +   M + LE+YER SY   +    +  +TQ ++  EY KLK K E +Q  Q+   G    +L L
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAE-KVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNL 122          

HSP 2 Score: 40.817 bits (94), Expect = 3.363e-35
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+QLE+QL +SL  +RS K++  L+ ++ELQ KE+ L
Sbjct:  123 KELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 2.782e-34
Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRGKV+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +   M + LE+YER SY   +A   +  E++ ++  EY KLK K E +Q   +   G    +L L
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAE-KALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNL 122          

HSP 2 Score: 39.2762 bits (90), Expect = 2.782e-34
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+QLE+QL SSL  + S K+   L+ +SELQ KE  L
Sbjct:  123 KELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.727e-34
Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASY-EEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRGKV+LKRIEN INRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS++GKLY++ +   M + LE+YER SY   +    +  +TQ ++  EY KLK K E +Q  Q+   G    +L L
Sbjct:    1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAE-KVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNL 122          

HSP 2 Score: 40.817 bits (94), Expect = 4.727e-34
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+QLE+QL +SL  +RS K++  L+ ++ELQ KE+ L
Sbjct:  123 KELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.306e-33
Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRG+V+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ +   M + LE+YER SY   Q     +        EY +LK K E L+  QR Y G
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLG 114          

HSP 2 Score: 38.891 bits (89), Expect = 2.306e-33
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  603 GKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            G+   A + KEL+ LE+QL ++L  +RS KN+   D ++ELQ KE+ +
Sbjct:  114 GEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAI 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.916e-33
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FSS+GKL+E+ +   M + LE+Y+R  Y   Q   +   +++    E+ KLK + E L+  +R + G    +L L
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122          

HSP 2 Score: 36.965 bits (84), Expect = 3.916e-33
Identity = 18/48 (37.50%), Postives = 31/48 (64.58%), Query Frame = 3
Query:  603 GKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            G+  D+ + KEL+ LE QL +++  +RS KN+   + +S LQ K++ L
Sbjct:  114 GEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKAL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.917e-33
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFSS+GKL+E+ +   M + LE+Y+R  Y   Q   +   +++    E+ KLK + E L+  +R + G    +L L
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122          

HSP 2 Score: 37.3502 bits (85), Expect = 3.917e-33
Identity = 18/48 (37.50%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  603 GKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            G+  D+ + KEL+ LE QL +++  +RS KN+   + +S LQ K+++L
Sbjct:  114 GEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 8.642e-33
Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRG+V+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ +   M + LE+YER SY   Q     +        EY +LK K E L+  QR Y G
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLG 114          

HSP 2 Score: 36.965 bits (84), Expect = 8.642e-33
Identity = 18/48 (37.50%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  603 GKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            G+   A + KEL+ LE+QL ++L  +R+ KN+   + ++ELQ KE+ +
Sbjct:  114 GEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAI 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.486e-32
Identity = 69/118 (58.47%), Postives = 85/118 (72.03%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQA----NHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRG+VELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS +GKL+E+ S   M + LE+YER SY   Q     +H +A+   +   EY +LK K E L+  QR Y G
Sbjct:    1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSM--EYSRLKAKIELLERNQRHYLG 116          

HSP 2 Score: 33.4982 bits (75), Expect = 2.486e-32
Identity = 16/37 (43.24%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEE 740
            K+L+ LE+QL ++L  +RS KN+   + L+ LQ KE+
Sbjct:  125 KDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEK 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.058e-31
Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRLXRSWN 642
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS++GKL+E+ +   M + LE+YER S+   Q          +   E+ KLK + E LQ  Q+ Y G    +L +    N
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQN 127          

HSP 2 Score: 33.4982 bits (75), Expect = 2.058e-31
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+ LE QL S+L  +RS KN+   + +S LQ ++  L
Sbjct:  123 KELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRAL 161          
The following BLAST results are available for this feature:
BLAST of EY728832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
AGL6_ARATH3.362e-3561.67Agamous-like MADS-box protein AGL6 OS=Arabidopsis ... [more]
MAD14_ORYSJ3.363e-3557.72MADS-box transcription factor 14 OS=Oryza sativa s... [more]
MAD15_ORYSJ2.782e-3456.10MADS-box transcription factor 15 OS=Oryza sativa s... [more]
MAD14_ORYSI4.727e-3456.10MADS-box transcription factor 14 OS=Oryza sativa s... [more]
AP1_SINAL2.306e-3357.02Floral homeotic protein APETALA 1 OS=Sinapis alba ... [more]
AGL8_ARATH3.916e-3352.46Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]
AGL8_SINAL3.917e-3352.46Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]
AP1_ARATH8.642e-3357.02Floral homeotic protein APETALA 1 OS=Arabidopsis t... [more]
CAL_ARATH2.486e-3258.47Transcription factor CAULIFLOWER OS=Arabidopsis th... [more]
AGL8_SOLTU2.058e-3151.18Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728832 ID=EY728832; Name=EY728832; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGGATGAAACAAACCAATTAGCAAAATTAAAGGTACCCAACT
CAGATCAAGTCAATTTAATCTCTCCTTTTAGGAGTGTTCTATACTAAATC
TTAAACCTAGCTATCAAAGCAACCTGATCCCAGCTTCTTGCCCTAAACAA
CAAGATCTGCAGAAACAAAATCTACTAATTTATAATTTATTTTTTAGCCT
AAAGAAACCCAAAAAAAACAAAAAATCATCCAGCTATCCAGCACTTGTAA
GTATATTAATAATGGGAAGGGGAAAAGTAGAGCTGAAGAGGATAGAGAAC
AAAATAAATCGACAGGTGACTTTTGCAAAGAGAAGGAATGGATTGTTAAA
GAAAGCTTATGAGCTCTCAGTTTTGTGTGATGCTGAGGTTGCTCTTATCA
TCTTCTCTAGCCGCGGGAAGCTCTATGAATTCTGCAGCAGCCCTAGTATG
CACCAGACACTTGAGAAGTATGAAAGGTGTAGTTATGGAACACTGCAAGC
AAATCATCAATCAGCCAAAGAGACGCAGGCCAGCTACGAGGAATACATAA
AACTCAAAGAGAAACATGAGGCCCTACAGCACTTGCAAAGACAATATTGG
GGGGGAAGATTTGGGACGCTTAGGCTTANAAGGAGTTGGAACAGCTTGAG
AGACAGCTGGGCAGTTCATTGGGCCGAGTAAGGTCACTCAAGAACCGGAA
TCAGCTGGATAAGCTTTCTGAACTTCAAGGAAAGGAAGAAATGTTGCTGG
GAAGCCCATATATTTAAGTATGAAGTTGGGAGGAATAATGCAGTCGGAAT
CCATCATGGCAGTGAGAACAAATAATAACACAATGTCATCGAGGTCTTGG
CCTACACATGTATGCCTGGTCCCCTGATA
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