EY728832

Overview
NameEY728832
Unique NameEY728832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.920e-31
Identity = 67/114 (58.77%), Postives = 86/114 (75.44%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRGKVE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF S+  + +T+E+Y RC    L  ++ + ++TQ   +E  KLK K+E+L    R   G
Sbjct:    1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERYYRCKDNLL--DNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVG 111          

HSP 2 Score: 33.113 bits (74), Expect = 5.920e-31
Identity = 18/50 (36.00%), Postives = 29/50 (58.00%), Query Frame = 3
Query:  597 LGGKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            L G+  +  + KEL+ LERQL  +L   R  K +  ++++ EL+ KE  L
Sbjct:  109 LVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKEREL 158          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.701e-30
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRLXRSWN 642
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS++GKL+E+ +   M + LE+YER S+   Q          +   E  KLK + E LQ  ++ Y G    +L +    N
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQN 127          

HSP 2 Score: 33.8834 bits (76), Expect = 1.701e-30
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KEL+ LE QL S+L  +RS KN+   + +S LQ ++  L
Sbjct:  123 KELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRAL 161          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.067e-30
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S  SM   LE+Y+R S+        + ++ +   +EY  LK K +ALQ  QRQ  G +  TL +
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTI 122          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.067e-30
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S  SM   LE+Y+R S+        + ++ +   +EY  LK K +ALQ  QRQ  G +  TL +
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTI 122          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.048e-29
Identity = 65/123 (52.85%), Postives = 90/123 (73.17%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYER-CSYGTLQANHQSAKETQASY--EEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRGK+E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++ ++  T+E+Y++ CS  T   N  + +E  A+Y  +E  KL+++ + +Q+  R   G    +L
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN-NIRSTIERYKKACSDST---NTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 119          

HSP 2 Score: 28.1054 bits (61), Expect = 4.048e-29
Identity = 13/36 (36.11%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKE 737
            KEL+Q+E +L  ++ R+RS K+   L ++   Q +E
Sbjct:  122 KELKQVENRLEKAISRIRSKKHELLLVEIENAQKRE 157          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.968e-28
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 1
Query:  265 GRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASY--EEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            GRGK+E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ S+ S+  T+E+Y++    +  +N  S  E  A Y  +E  KL+++  ++Q+  RQ  G   G++
Sbjct:   18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAI--SDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSM 135          

HSP 2 Score: 28.1054 bits (61), Expect = 1.968e-28
Identity = 14/36 (38.89%), Postives = 21/36 (58.33%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKE 737
            KEL  LE +L  S+ R+RS KN     ++  +Q +E
Sbjct:  138 KELRNLEGRLERSITRIRSKKNELLFSEIDYMQKRE 173          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.557e-28
Identity = 63/121 (52.07%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  259 IMGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            I  RGK+E+KRIEN  NRQVTF KRR+GLLKKAYELSVLCDAEVAL++FSSRG+LYE+ S+ S+ +T+E+Y++ +  T  A+  +    Q   +E  KLK++   LQ+  R   G    T+
Sbjct:   42 IGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY-SNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTM 161          

HSP 2 Score: 29.261 bits (64), Expect = 2.557e-28
Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            +EL+QLE +L   LG++R+ KN     ++  +Q +E  L
Sbjct:  164 RELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETEL 202          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.559e-28
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTL-QANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRGK+E+KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ALI+FSSRG+LYEF +  S   T+E+Y++ S  T   A        Q   +E  K++ + + LQ+  R   G   G +
Sbjct:    1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNM 121          

HSP 2 Score: 26.9498 bits (58), Expect = 2.559e-28
Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKE 737
            KEL+ LE +L   + R+RS K+     ++  +Q +E
Sbjct:  124 KELKSLENRLEKGISRIRSKKHELLFSEIEYMQKRE 159          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.655e-28
Identity = 61/120 (50.83%), Postives = 83/120 (69.17%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            +GRGK+E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS+RG+LYE+ ++ S+  T+E+Y++     +     +   TQ   +E  KL+ +   +Q+  R   G   G+L
Sbjct:   16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN-SVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 134          

HSP 2 Score: 28.1054 bits (61), Expect = 5.655e-28
Identity = 14/36 (38.89%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKE 737
            KEL+ LE +L   + RVRS KN   + ++  +Q +E
Sbjct:  137 KELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKRE 172          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.467e-27
Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRLXRSWN 642
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS++GKL+E+ +   M + LE+YER S+   Q          +   E+ KLK + E LQ  Q+ Y G    +L +    N
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQN 127          
The following BLAST results are available for this feature:
BLAST of EY728832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
AGL13_ARATH5.920e-3158.77Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
AGL8_SOLCO1.701e-3050.39Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
MAD18_ORYSJ4.067e-3056.56MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI4.067e-3056.56MADS-box transcription factor 18 OS=Oryza sativa s... [more]
AGL11_ARATH4.048e-2952.85Agamous-like MADS-box protein AGL11 OS=Arabidopsis... [more]
AG_ARATH1.968e-2854.55Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]
MAD58_ORYSJ2.557e-2852.07MADS-box transcription factor 58 OS=Oryza sativa s... [more]
MAD21_ORYSJ2.559e-2851.24MADS-box transcription factor 21 OS=Oryza sativa s... [more]
AGL1_ARATH5.655e-2850.83Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AGL8_SOLLC2.467e-2751.18Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728832 ID=EY728832; Name=EY728832; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGGATGAAACAAACCAATTAGCAAAATTAAAGGTACCCAACT
CAGATCAAGTCAATTTAATCTCTCCTTTTAGGAGTGTTCTATACTAAATC
TTAAACCTAGCTATCAAAGCAACCTGATCCCAGCTTCTTGCCCTAAACAA
CAAGATCTGCAGAAACAAAATCTACTAATTTATAATTTATTTTTTAGCCT
AAAGAAACCCAAAAAAAACAAAAAATCATCCAGCTATCCAGCACTTGTAA
GTATATTAATAATGGGAAGGGGAAAAGTAGAGCTGAAGAGGATAGAGAAC
AAAATAAATCGACAGGTGACTTTTGCAAAGAGAAGGAATGGATTGTTAAA
GAAAGCTTATGAGCTCTCAGTTTTGTGTGATGCTGAGGTTGCTCTTATCA
TCTTCTCTAGCCGCGGGAAGCTCTATGAATTCTGCAGCAGCCCTAGTATG
CACCAGACACTTGAGAAGTATGAAAGGTGTAGTTATGGAACACTGCAAGC
AAATCATCAATCAGCCAAAGAGACGCAGGCCAGCTACGAGGAATACATAA
AACTCAAAGAGAAACATGAGGCCCTACAGCACTTGCAAAGACAATATTGG
GGGGGAAGATTTGGGACGCTTAGGCTTANAAGGAGTTGGAACAGCTTGAG
AGACAGCTGGGCAGTTCATTGGGCCGAGTAAGGTCACTCAAGAACCGGAA
TCAGCTGGATAAGCTTTCTGAACTTCAAGGAAAGGAAGAAATGTTGCTGG
GAAGCCCATATATTTAAGTATGAAGTTGGGAGGAATAATGCAGTCGGAAT
CCATCATGGCAGTGAGAACAAATAATAACACAATGTCATCGAGGTCTTGG
CCTACACATGTATGCCTGGTCCCCTGATA
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