EY728832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.548e-20 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEK 564 M R + E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FSS GKL F SS SM++ ++KY S L Q + + + +Y L E+ Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS-SMNEIIDKYNTHS-NNLGKAEQPSLDLNLEHSKYAHLNEQ 99 HSP 2 Score: 32.7278 bits (73), Expect = 1.548e-20 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 633 ELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746 EL+QLE+ L + L RV K++ ++++SELQ K L Sbjct: 122 ELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQL 159
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20 Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSP-SMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627 MGRG+VELK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S P + ++Y + + Q +E ++K+++ L+ + RQY G +L L Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAP----STRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTL 119
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRLXRSWNSLRD 654 MGRGK+ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSS GKLY+F SS SM +++Y + Q + A E + E L+++ ALQ RQ G + L + NSL + Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS-SMKSVIDRYNKSKIEQQQLLN-PASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV-NELNSLEN 128
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19 Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSS------PSMHQTLEKYERCSYGTL-QANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLR----------LXRSWNSLRDSWAVHW 672 MGRGK+E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFSS GKL ++C+ P + + LEKY+ S L H+S E ++K++++ +Q R G +L+ L +LRD HW Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLS------AEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHW 148
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19 Identity = 51/99 (51.52%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQA-NHQSAKETQASYEEYIKL 555 MGR K+E+KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S+ GKLY F S ++ + L++Y + L+A +HQS S+ E ++L Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNYGSHYELLEL 99
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHQTLEKYERCSYGTL-QANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621 MGRGK+E+KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF + GK++E+CS S ++ L+ Y++ S L A H++ E ++K++++ +Q R G +L Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS------NEIDRIKKENDNMQVKLRHLKGEDINSL 116
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603 MGRGK+ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G+LY+F SS SM +E+Y+ + + + E + E L+++ + L H RQ G Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQEAGEEHCRLLNPMS-EAKFWQREVTTLRQQVQNLHHNNRQLLG 112
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCS-SPSMHQTLEKYERCS 483 MGRGK+E+KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF+S GK++EFCS S ++ L+ Y + S Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLS 75
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.473e-19 Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-CSSPSMHQTLEKYERCSYGTL-QANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTLRL 627 MGRGK+E+KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF+S GK+ ++ C S + L++Y++ S L A H++ E ++K+++++LQ R G +L L Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLS------NEIDRIKKENDSLQLELRHLKGEDIQSLNL 118
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.473e-19 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603 MGRGK+ ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFSS G+LYE+ SS SM +++Y + S QA E + E L+++ LQ RQ G Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMG 112 The following BLAST results are available for this feature:
BLAST of EY728832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728832 ID=EY728832; Name=EY728832; organism=Citrus sinensis; type=EST; length=879bpback to top |