EY728815

Overview
NameEY728815
Unique NameEY728815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728815 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 60/197 (30.46%), Postives = 92/197 (46.70%), Query Frame = 1
Query:   25 PGNNGDSVTF---DLSSNNLQGPLPVPPPGTANY---LASNSSLTGEIPSWICNLNILESLVLSHNNLSGLLPQCLGNFSDELSVLDLQANNFFGTIPNTFIKESRLGVVDLSHNLFQGRIP-RSLINCSKLEFLGLGNNQISDTFPSWLGSLPKLNVLILRSNIFYGIIEEPRTGCXISXLRIIDLSDNRFTGKLP 594
            P   GD  T    +L +N   GPLP       +    L S ++ TG+IP  + NL  L    +  N+LSG +P  +GN++  L  LDLQ  +  G IP +    + L  + ++    Q       L N  K++ L L N  I    P ++GS+ +L  L L SN+  G+I  P T   +     + L++N  TG +P
Sbjct:  154 PPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIPDFIGNWT-LLERLDLQGTSMEGPIPPSISNLTNLTELRITDLRGQAAFSFPDLRNLMKMKRLVLRNCLIRGPIPEYIGSMSELKTLDLSSNMLTGVI--PDTFRNLDAFNFMFLNNNSLTGPVP 347          
BLAST of EY728815 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 1
Query:  172 NILESLVLSHNNLSGLLPQCLGNFSDELSVLDLQANNFFGTIPNTFIKESRLGVVDLSHNLFQGRIPRSLINCSKLEFLGLGNNQISDTFPSWLGSLPKLNVLILRSNIFYG 507
            N++  L     +LSG L   +GN ++ L  + LQ NN  G IP       +L  +DLS+N F G IP S+   S L++L L NN +S  FP+ L  +P L+ L L  N   G
Sbjct:   74 NLVIGLGAPSQSLSGTLSGSIGNLTN-LRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRG 184          
BLAST of EY728815 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  124 SNSSLTGEIPSWICNLNILESLVLSHNNLSGLLPQCLGNFSDELSVLDLQANNFFGTIPNTFIKESRLGVVDLSHNLFQGRIPRSLINCSKLEFLGLGNNQISDTFPSWLGSLPKLNVLILRSNIFYGIIEEPRTGCXISXLRIIDLSDNRFTGKLPSK 600
            S   L+G +   + NL  L  L +S NNL+G LP  L    D+L+ LD   N+F G +P +    + L  ++L  N   G +        KLE + L +NQ++   P    +L  L  L L+ N F G I   R    +  +  +++++N+FTG +P++
Sbjct:   79 SGRGLSGSLGYQLGNLKSLTYLDVSKNNLNGNLPYQL---PDKLTYLDGSENDFNGNVPYSVSLMNDLSYLNLGRNNLNGELSDMFQKLPKLETIDLSSNQLTGKLPQSFANLTGLKTLHLQENQFKGSINALR---DLPQIDDVNVANNQFTGWIPNE 231          
BLAST of EY728815 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  127 NSSLTGEIPSWICNLNILESLVLSHNNLSGLLPQCLGNFSDELSVLDLQANNFFGTIPNTFIKESRLGVVDLSHNLFQGRIPRSLINCSKLEFLGLGNNQISDTFP 444
            N++L+G++   +  L  L+ L L  NN++G +P+ LGN + EL  LDL  NN  G IP+T  +  +L  + L++N   G IPRSL     L+ L L NN ++   P
Sbjct:   77 NANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLT-ELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIP 181          
BLAST of EY728815 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 1
Query:  127 NSSLTGEIPSWICNLNILESLVLSHNNLSGLLPQCLGNFSDELSVLDLQANNFFGTIPNTFIKESRLGVVDLSHNLFQGRIPRSLINCSKLEFLGLGNNQISDTFP 444
            N+ L+G++   +  L  L+ L L  NN++G +P  LGN ++ +S LDL  N+F G IP++  K  +L  + L++N   G IP SL N   L+ L L NN++S + P
Sbjct:   81 NADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVS-LDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVP 185          
The following BLAST results are available for this feature:
BLAST of EY728815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
Y5343_ARATH2.605e-1130.46Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH5.803e-1137.50Probable LRR receptor-like serine/threonine-protei... [more]
SRF4_ARATH5.803e-1130.19Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
BAK1_ARATH5.803e-1137.74BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH9.898e-1137.74Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-A03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728815 ID=EY728815; Name=EY728815; organism=Citrus sinensis; type=EST; length=907bp
CACGCGTCCGATCCTGTTCTTCTTCCAGGGAATAACGGTGATTCGGTGAC
TTTTGATCTTAGCTCTAATAATTTACAAGGACCACTCCCAGTTCCACCCC
CTGGAACCGCTAACTATCTAGCTTCAAACAGTAGCTTAACAGGGGAAATT
CCATCGTGGATATGCAATTTGAATATTCTTGAAAGCCTTGTTTTGTCTCA
CAATAACTTAAGTGGCTTGCTTCCTCAGTGTTTAGGCAATTTCAGCGATG
AACTTTCAGTGCTCGACTTGCAGGCTAACAACTTCTTTGGGACCATCCCA
AATACTTTCATTAAAGAAAGTAGATTAGGCGTGGTTGATTTAAGCCATAA
TCTGTTTCAAGGAAGAATTCCAAGATCATTGATCAACTGTTCAAAGTTGG
AATTTCTTGGTCTTGGGAACAACCAGATTAGTGACACTTTTCCCTCTTGG
TTAGGAAGTCTACCAAAATTGAATGTTCTCATCCTACGATCCAACATATT
TTATGGCATTATAGAAGAACCCAGAACTGGTTGTNGGATTTCTANACTCC
GCATTATTGACCTATCTGACAACAGATTTACTGGAAAGCTTCCATCAAAG
AGNTTCCCTGTGTNGGAATGCTATGANAATTGTCAATGCAAGTGAGCTAA
AATATCTGCNAGATGTGCTTTCTCCGTCTGGAAAATTGTCCAATGATATA
CTTAGCACTTATGACTACTCATTAACAATGAACGAGCAAGGGCGAATGAT
GACATATTACAAGATCCGGGATATCTCGGCGGGCATTATTCTCTCAAGAC
ATAATGTGAATGGGGCGATTCAGCATCCAGTGCGAATTTAAAGGGACTTC
AGTTCTAAACCTCAGGTAAATATCTCCAGGGCCTATCCGGCAGGTTGGGG
CATCTAA
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