EY728812

Overview
NameEY728812
Unique NameEY728812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.470e-22
Identity = 51/129 (39.53%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  202 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKA 588
            KR+ +EL  L        SA P ++++F W  TI G + + Y    + +++ FP  YP+  P V F T  +HPN+++ G+ICLDILKE+WS    +  +LLSI SLL +PN D PL    A ++K+  A
Sbjct:   33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.450e-22
Identity = 50/136 (36.76%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--------WSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYK 576
            M S+ +L E ++L ++P           ++  W   + GPSD+ Y GG+F   I FPP+YP++PPK+ F ++++HPNI  +G +C+ IL           WSPA  I  VLLS+ SL  +PN D P   + A  Y+
Sbjct:    1 MVSRFLLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYR 136          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.450e-22
Identity = 52/153 (33.99%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            +A+ R+ +E K  +KD P    A PV       ++F+W+  I G  D+ + GG++ + + F  D+P  PPK  F   +FHPN+  +G++CL +L E   W P+++I ++L+ I  LL  PN +DP   E   +Y  ++A YE   +    KYA
Sbjct:    4 IAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.450e-22
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 1
Query:  214 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQK 624
            K+LKDL K P    SAG V E ++F W  TI+GP D+ Y GG F   + FP +YP  PP V F + ++HPN+  +G +C+ IL              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++  +  ++       +K
Sbjct:   11 KQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRK 161          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21
Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  187 RVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKA 588
            R    KR+ +EL  L        SA P ++++F W  TI G   + Y    + +++ FP  YP+  P V F T  FHPN++S+G+ICLDILK++WS    +  +LLS+ SLL +PN + PL P  A ++++  A
Sbjct:   28 RGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTA 161          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21
Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  202 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKA 588
            KR+ +EL  L        SA P ++++F W  TI G + + Y    + +++ FP  YP+  P V F T  +HPN+++ G+ICLDILK++WS    +  +LLSI SLL +PN D PL    A ++K+  A
Sbjct:   33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21
Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  202 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKA 588
            KR+ +EL  L        SA P ++++F W  TI G + + Y    + +++ FP  YP+  P V F T  +HPN+++ G+ICLDILK++WS    +  +LLSI SLL +PN D PL    A ++K+  A
Sbjct:   33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21
Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            MAS    +E+ D+ K   +      V +D+  +  T  GP+DS Y GGV+ + +  P  YP+K P V F  K++HPN++ S+G++CLD++ + WSP   +  V  S +  LL  PNP DP   E A +   D+A YE   + + +KYA
Sbjct:    1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21
Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            +A  R+ +E K  +KD P    A P        ++ + +  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   ++  D+  YE   R+  +K++
Sbjct:    4 IALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFS 156          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21
Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 1
Query:  196 ASKRILKELKDL-QKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            A++R+ +EL DL +    T  +     E +  W   ++ P  +PY  G F + I+FPP YPF PPK+ F+TK++HPN++  G +CL I+  + W P     +VL ++ +++ +P P+ PL  ++A  +  +   +  TA  +T+K A
Sbjct:    3 ATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNA 148          
The following BLAST results are available for this feature:
BLAST of EY728812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
UBE2C_HUMAN6.470e-2239.53Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens ... [more]
UBC_ASFK58.450e-2236.76Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC9_CAEEL8.450e-2233.99SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UBC13_ARATH8.450e-2235.10Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBE2C_XENLA1.441e-2138.06Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevi... [more]
UBE2C_MACFA1.441e-2138.76Ubiquitin-conjugating enzyme E2 C OS=Macaca fascic... [more]
UBE2C_BOVIN1.441e-2138.76Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN... [more]
UBC6_ARATH1.441e-2136.49Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis t... [more]
UBC9_PAGMA1.882e-2134.64SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ub... [more]
UBC84_DROME1.882e-2132.65Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-H10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728812 ID=EY728812; Name=EY728812; organism=Citrus sinensis; type=EST; length=839bp
CACGCGTCCGGTTGAAGGACACAAAGCAAGGGGTTGATAGAGGAGCGAGG
CGGGGGCGGCTTGACGACCTAGATCTGCTTCACCGTTTCGCTTTCTCGAC
GCTATCGCTCTCCGATCCTGTTCTCTGCCGCGCAAGTTTCGCAGGTCTTA
AGGTTCGTTGTAGTTTCAATTTTAATAATCCCTTGAAGAGTCATGGCTTC
AAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGATCCTCCCACGT
CTTGCAGCGCTGGCCCTGTGGCTGAAGACATGTTCCACTGGCAAGCAACA
ATTATGGGCCCTTCTGATAGCCCATATGCAGGAGGTGTATTTTTAGTTAC
CATTCATTTTCCTCCTGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTA
GGACCAAGGTCTTCCACCCGAACATCAACAGCAATGGAAGCATCTGTCTT
GATATCCTTAAAGAACAGTGGAGTCCAGCGCTTACCATTTCAAAGGTCCT
GCTCTCTATCTGCTCCTTGCTTACTGATCCAAATCCCGACGACCCTCTGT
ACCCGGAGATTGCCCACATGTACAAGTCCGACAAGGCCANATATGAATCC
ACGGCCAGGAGCTGGACACAGAAGTATGCCATGGGATGAAGGTTGTTANG
ATATTGCANAAAAANGGAGCATTATTGAAATATGTNGTGTGTGTTGTCTA
TCTATTTTCTTTAACTTGCTTTGGGGAGGGCANACGTTGTGTTTACAATG
TGTTGGGAGGAATGCAAGGCCGGACTTTTAGTTATGGGATGTTGGTTGAA
CTCTTCAGGACTAATATGTCTATCTTAAAAAAAAAGGCA
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