EY728812

Overview
NameEY728812
Unique NameEY728812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.626e-65
Identity = 117/149 (78.52%), Postives = 132/149 (88.59%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYAMG 636
            MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY+GGVF V+I F  DYPFKPPKV F+TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPL PEIAH+YK DK+ YESTA+ WTQKYAMG
Sbjct:    1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.623e-65
Identity = 110/147 (74.83%), Postives = 130/147 (88.44%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYAM 633
            M+ KRI KEL DL +DPP+SCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYP KPPK+A  TK++HPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTD NPDDPL PEIAH+YK D+  YE+TA+ WT+KYA+
Sbjct:    1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.623e-65
Identity = 113/147 (76.87%), Postives = 125/147 (85.03%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYAM 633
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSN SICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPL PEIA +YK+D+  Y   +R WTQKYAM
Sbjct:    1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.988e-63
Identity = 111/147 (75.51%), Postives = 123/147 (83.67%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYAM 633
            MA KRI KEL DL +DPP  CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPFKPPKV F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPL PEIA +YK+D+  Y  TAR WTQKYAM
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.988e-63
Identity = 111/147 (75.51%), Postives = 123/147 (83.67%), Query Frame = 1
Query:  193 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYAM 633
            MA KRI KEL DL +DPP  CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPFKPPKV F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPL PEIA +YK+D+  Y  TAR WTQKYAM
Sbjct:    1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 88/145 (60.69%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  196 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            ++KRI KEL ++  DPP +CSAGP  ++++ W++TI+GP  S Y GGVF + I F PDYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPL   IA  Y +++A ++  AR WT++YA
Sbjct:   56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 88/145 (60.69%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  196 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            ++KRI KEL ++  DPP +CSAGP  ++++ W++TI+GP  S Y GGVF + I F PDYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPL   IA  Y +++A ++  AR WT++YA
Sbjct:   56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 88/145 (60.69%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  196 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            ++KRI KEL D+  DPP +CSAGP  ++++ W++TI+GP  S Y GGVF + I F P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPL   IA  Y +++A ++  AR WT++YA
Sbjct:   48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 88/145 (60.69%), Postives = 112/145 (77.24%), Query Frame = 1
Query:  196 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            ++KRI KEL D+  DPP +CSAGP  ++++ W++TI+GP  S Y GGVF + I F P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPL   IA  Y +++A ++  AR WT++YA
Sbjct:   48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192          
BLAST of EY728812 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.864e-48
Identity = 87/145 (60.00%), Postives = 110/145 (75.86%), Query Frame = 1
Query:  196 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLYPEIAHMYKSDKAXYESTARSWTQKYA 630
            ++KRI KEL ++  DPP +CSAGP  ++++ W +TI+GP  S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPL   IA  Y  ++  ++  AR WT++YA
Sbjct:   87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231          
The following BLAST results are available for this feature:
BLAST of EY728812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
UBC12_ARATH1.626e-6578.52Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UBC4_CANAL3.623e-6574.83Ubiquitin-conjugating enzyme E2 4 OS=Candida albic... [more]
UB2D3_BOVIN3.623e-6576.87Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
U2D2B_RAT1.988e-6375.51Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]
U2D2B_MOUSE1.988e-6375.51Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]
UB2E2_MOUSE1.806e-4860.69Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus... [more]
UB2E2_HUMAN1.806e-4860.69Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]
UB2E1_MOUSE1.806e-4860.69Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus... [more]
UB2E1_HUMAN1.806e-4860.69Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens... [more]
UBCD2_DROME6.864e-4860.00Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-H10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728812 ID=EY728812; Name=EY728812; organism=Citrus sinensis; type=EST; length=839bp
CACGCGTCCGGTTGAAGGACACAAAGCAAGGGGTTGATAGAGGAGCGAGG
CGGGGGCGGCTTGACGACCTAGATCTGCTTCACCGTTTCGCTTTCTCGAC
GCTATCGCTCTCCGATCCTGTTCTCTGCCGCGCAAGTTTCGCAGGTCTTA
AGGTTCGTTGTAGTTTCAATTTTAATAATCCCTTGAAGAGTCATGGCTTC
AAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGATCCTCCCACGT
CTTGCAGCGCTGGCCCTGTGGCTGAAGACATGTTCCACTGGCAAGCAACA
ATTATGGGCCCTTCTGATAGCCCATATGCAGGAGGTGTATTTTTAGTTAC
CATTCATTTTCCTCCTGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTA
GGACCAAGGTCTTCCACCCGAACATCAACAGCAATGGAAGCATCTGTCTT
GATATCCTTAAAGAACAGTGGAGTCCAGCGCTTACCATTTCAAAGGTCCT
GCTCTCTATCTGCTCCTTGCTTACTGATCCAAATCCCGACGACCCTCTGT
ACCCGGAGATTGCCCACATGTACAAGTCCGACAAGGCCANATATGAATCC
ACGGCCAGGAGCTGGACACAGAAGTATGCCATGGGATGAAGGTTGTTANG
ATATTGCANAAAAANGGAGCATTATTGAAATATGTNGTGTGTGTTGTCTA
TCTATTTTCTTTAACTTGCTTTGGGGAGGGCANACGTTGTGTTTACAATG
TGTTGGGAGGAATGCAAGGCCGGACTTTTAGTTATGGGATGTTGGTTGAA
CTCTTCAGGACTAATATGTCTATCTTAAAAAAAAAGGCA
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