EY728806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 3.911e-13 Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 441 EKSCLRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYT 650 + LRSP + QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++ D++G L +W++++T Sbjct: 492 QSQTLRSPTKIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIIFT 563 HSP 2 Score: 33.113 bits (74), Expect = 3.911e-13 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 676 VGDDPWHEFCXMVRKI 723 VGDDPW EFC MV++I Sbjct: 572 VGDDPWPEFCNMVKRI 587
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13 Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 3 Query: 231 EKRQGNGNTCRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDA-------EKSCLRSPQESQSRQ-------IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPK 764 EK +G+G ++FG + VD +N +P +S M P L S + + + +P VS EKS ++ Q S+ Q RSCTKVH QG+A+GR+VDL++F Y++L +L++M + +G+L K WQ+VYT G + +IYT EEV+ + K Sbjct: 601 EKTEGSG--FKIFGFK-VDTTN----APNNHLSSPMAATHE-PMLQTPSSLN-QLQPVQTDCIPEVSVSTAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 783
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.171e-12 Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 387 SEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQ-----IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKL 773 + P+ I + P +C A K S S Q RS TKV MQGIAVGRAVDLT Y++L+ +LEEM +I+G L KW VV+T G ++ FIY+++EVK + K+K+ Sbjct: 450 NSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLA-RDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 582
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12 Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 261 RLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLR-SPQESQSRQ---IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKLQV 779 RLFGI L+ +S M R I D HS+P +S++ VS + ++ SP+E QS+Q RS TKV MQG+ VGRAVDL Y +L+ +E++ DI+G+L +W++V+T G + FI++ EEVK + P +L++ Sbjct: 454 RLFGIDLMSSSLAVPEEKTAPM-------RPINISKPTMDSHSDP----KSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS-RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRM 618
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.406e-12 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 441 EKSCLRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKL 773 + LRSP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++ D++G L +W++ +T G ++ FIY+ EEVKNL + L Sbjct: 491 QSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQA-RNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSL 603
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 252 NTCRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPK 764 ++CRLFG L + PA S + D+ + +D SNI+ S + C S ++ Q RS KV MQG AVGRAVDLT Y++L+K+LE+M +IEG+L KW +V+T G ++ FIY ++EVK + K Sbjct: 454 SSCRLFGFDLT-------SKPA---SATIPHDKQLISVD---------SNISDS---TTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP-KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 601
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 441 EKSCLRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNL 755 + LRSP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++ DI+G L +W++ +T G ++ IY+ EEVKNL Sbjct: 492 QSQTLRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNL 598 The following BLAST results are available for this feature:
BLAST of EY728806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728806 ID=EY728806; Name=EY728806; organism=Citrus sinensis; type=EST; length=820bpback to top |