EY728804

Overview
NameEY728804
Unique NameEY728804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_VIBHB (Vitamin B12-binding protein OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=btuF PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 31/85 (36.47%), Postives = 51/85 (60.00%), Query Frame = -2 
Query:   25 PPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 279
            P  R+++L    TEI Y  G GD+L+   + S YPE A  L +V  Y+ + +E ++AL+PDLV+A     P + L++L + G+ +
Sbjct:   22 PAQRIISLAPHSTEIAYSAGLGDKLIAVSEMSDYPEQAKDLEKVSNYQGIKLERIIALQPDLVIAWPAGNPAKELEKLEQFGIPI 106
The following BLAST results are available for this feature:
BLAST of EY728804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
BTUF_VIBHB9.579e-1136.47Vitamin B12-binding protein OS=Vibrio harveyi (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-G11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728804 ID=EY728804; Name=EY728804; organism=Citrus sinensis; type=EST; length=889bp
CGACGGCGCGTCCGGCACGCTCACGACCTTCACGCCGACTTCGCTCAGGC
GCTTGAGCGCCTCGGGCGGGCCGGCCTGCTCGGACGCCAGCACCAGGTCG
GGCTTGAGCGCCAGCACGCCCTCCACCGGCACCGCGCGGTAATAGCCGAC
GCGCGGCAGCCTGGTCGCGGCTTCCGGGTACAGGCTGGACTGGTCGTCGC
CCACCAGCCTGTCGCCCTGCCCCAGGCCGTACACGATCTCCGTCACGCTA
CCGCCCAGGGTCACCACGCGCGCAGGCGGCGCCGCCTGCGCGCAAGCCAC
CAGCATCCATCCCGCCGCCATCGCCAGCCATTTCTTCATTGCTTCATCCT
CACGCGGCCAACGGCACGCGGCACAGACCCAACATCAATTCGCGCCAGCC
CGGCAGTTCCGGCTTGCCCGGCTTGCGCTCGCCAAAGAACTGCGCGATCA
GGTCGCCGCTGGAAGAATACAGCTCCAGCGACGTCACCCAGCCATCGCTG
GTGGGCTTGTTGACCACCCACGCCGACGCGATGGCGGGGGTGTCCAGATG
CAGGTTGAACTTCGGGTCCACCATGTTATACCACGGGACGGTGCGGGTGA
ACTGATCAACGGGTCCGGTATGGATCTGGACTGTGCCTCGGTAGGCCCGC
GAAGCAATGAAGGCCAGCCATGTGCCCGCTTCAGACTGAGTCTCTCCGAG
ACGGGATCGGGAGTGCGGGCATGCCAAAGCGGTCGCCGCTGGCGTCCGGG
CCGGAAAGCGAACGATGCGTGGTCGGGATGGGTGTGGAGTCCTTAGAGAT
GACAGATACGGAGGGAGAGCAGACTGCGCAGAGCAGGCCATCCTGAGAAG
GAGAGTGGTGGCCGCGCGTACACCACGTCTGGGCTCGGG
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